Gene Caci_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1647 
Symbol 
ID8332990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1868594 
End bp1869385 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content79% 
IMG OID644954797 
ProductMethyltransferase type 12 
Protein accessionYP_003112409 
Protein GI256390845 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.505504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA GCGCCGCCAG CGCGACCGCC ACCTCCGCCA CCTCCGCCGC CCCCGCCGCG 
GCCCGCCGCG ACCGGGCCCG CACCGCCGTC CTGTGGCAGG CCCTGCGCAC CGTCCTCGAC
GCCTCCGGCC CGCGCGACGT CCTCGACGTC GGCGGCGGCA CCGGCGGCTT CGCCGTCCCG
ATCGCCGAGC TGGGCCACCG GGTCACCGTC GTGGACCCCA GCCCCGACGC GCTGGCCGCC
CTGGAGCGCC GCGCCGCCGA GTCCGGCGTG CCCAAGGAGG CGCTGCGCGC CGTCCAGGGC
GACCTGGCCG GGCTGCTGGA GCACGTGGAG CCCGGCAGCG TGGACCTGGT CCTGTGCCAC
GGCGTCCTGG AGATGGCCGA CGACCCGGCC GCCGGCCTGG CCACCGTCGC CGACGTGCTG
CGGCCCGGCG GCGTGGTGAG CCTGCTGGCG GCGAACCGCA CCGCGGCGGT GGTGGCGCGG
GCGCTCGGCG GGCACTTCGC CGAGGCGCGG CGCGCGCTGG CCGACCCGAC CGGCCGCTTC
GGCGCGCAGG ACCCGCTGGC GGCGCGGTTC GACGAGGAGC AGCTCTCGCG GCTGCTGCGC
GAGGCGCGGC TCACGGTGCA GTCGGTGCAC GGCGTGCGCG TGTTCACCGA CCTGGTCCCC
GGCGCGCTGG TGGACGCCGA CCCGCAGGCG GCCTCCGATC TCGCGGCGCT GGAGGCGGCT
GTCGCCGACC GGCCGGAGTT CCGCGCGGTG GCGGGCCGGC TGCACCTTCT GGCCCGCAAG
ATCGCTTCTT AA
 
Protein sequence
MADSAASATA TSATSAAPAA ARRDRARTAV LWQALRTVLD ASGPRDVLDV GGGTGGFAVP 
IAELGHRVTV VDPSPDALAA LERRAAESGV PKEALRAVQG DLAGLLEHVE PGSVDLVLCH
GVLEMADDPA AGLATVADVL RPGGVVSLLA ANRTAAVVAR ALGGHFAEAR RALADPTGRF
GAQDPLAARF DEEQLSRLLR EARLTVQSVH GVRVFTDLVP GALVDADPQA ASDLAALEAA
VADRPEFRAV AGRLHLLARK IAS