Gene Caci_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1629 
Symbol 
ID8332972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1851681 
End bp1851977 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content68% 
IMG OID644954779 
Productprotein of unknown function DUF77 
Protein accessionYP_003112391 
Protein GI256390827 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.394617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCG CGTTCTCTGT GACCCCGATC GGTGCCGGCG AAGGTGTCAG CGAGTATGTC 
GCCGACGCCG TGCGGGTGGT GCGCGAGAGC GGGCTGCCCA ACTCCACCGA CGCGATGTTC
ACGAGCATCG AGGGGGAGTG GGACGAGGTG ATGGCGGTGG TGAAGGCCGC TGTGGACGCG
GTCGCTGCGA AGGCGCCGCG GGTCAGCGTG GTGTTGAAGG CGGACATCCG CGCCGGGGTC
ACCGATGGTC TGACGGCGAA GGTGGCTGCG GTCGAGGAGA AGCTCGCCGG GCAGTGA
 
Protein sequence
MIIAFSVTPI GAGEGVSEYV ADAVRVVRES GLPNSTDAMF TSIEGEWDEV MAVVKAAVDA 
VAAKAPRVSV VLKADIRAGV TDGLTAKVAA VEEKLAGQ