Gene Caci_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1620 
Symbol 
ID8332963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1844014 
End bp1844766 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID644954770 
Producthypothetical protein 
Protein accessionYP_003112382 
Protein GI256390818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.239662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0508551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGATCG CCGCCGCCGT CGTACCGCAT CCACCGGTCC TCGTGCCCGA GGTCGCGCAG 
GGCTTTTCCC CGGACCTGGA CACGCTGCGC TCCGCCTGCG AGACGGCAGT CGGCCGCCTG
TACGCCGCCG GAGCCGACGA AGTGCTGATT GTAGGCGCAG GACCCGGTCA AGGTGACGAT
GTTGCCGCGC GGGGTGATTT CCGTGCTTAC GGAGTGGATC TGACCGTTGA CGGGCGGTGG
GGAACGCCGG ATTCGGTCAC GCAGGGCACC GCTCCGATGA CGCTCCCGTT CCTGATCGCC
GCCTGGCTCC TGCGCGACCG TCCGACCGAG CCCGTGCGGC GGCCGGTGAT GGTGGACGAA
CACGGCGGGG CAGTCGGCAA CGGGGCAGTC GGCAACAGGG CAGTCGGCAA CGGGACAGGC
AGCAGCGACA CAGTGAACAG CGCTGCGCGC CAAGCGATGC TGGTCCTCGG CGACGGCAGC
GCCTCGCGCA CCCCGCAAGC GCCCGGCCAC TTCGACGAAC GCGCCGAACC CTACGACGCG
GCAGTCGCCC GAGCCCTCGC CACCGCGGAC ACCGCGGCGC TCGCCGCCCT CGATCCGGAC
CTGTCGCGCG CACTGCACGT CGCCGGGCTC CCCGCCTGGA AGCTCCTCGC CGACGCGGCG
ACCGCATCAG GAGTCGAATA CGACGCCGAG CTGCTCTACG ACGAAGCGCC CTACGGCGTC
GGCTACTTCG TCGCCACCTG GCTCGCTCGT TGA
 
Protein sequence
MLIAAAVVPH PPVLVPEVAQ GFSPDLDTLR SACETAVGRL YAAGADEVLI VGAGPGQGDD 
VAARGDFRAY GVDLTVDGRW GTPDSVTQGT APMTLPFLIA AWLLRDRPTE PVRRPVMVDE
HGGAVGNGAV GNRAVGNGTG SSDTVNSAAR QAMLVLGDGS ASRTPQAPGH FDERAEPYDA
AVARALATAD TAALAALDPD LSRALHVAGL PAWKLLADAA TASGVEYDAE LLYDEAPYGV
GYFVATWLAR