Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1620 |
Symbol | |
ID | 8332963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1844014 |
End bp | 1844766 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954770 |
Product | hypothetical protein |
Protein accession | YP_003112382 |
Protein GI | 256390818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.239662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0508551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGATCG CCGCCGCCGT CGTACCGCAT CCACCGGTCC TCGTGCCCGA GGTCGCGCAG GGCTTTTCCC CGGACCTGGA CACGCTGCGC TCCGCCTGCG AGACGGCAGT CGGCCGCCTG TACGCCGCCG GAGCCGACGA AGTGCTGATT GTAGGCGCAG GACCCGGTCA AGGTGACGAT GTTGCCGCGC GGGGTGATTT CCGTGCTTAC GGAGTGGATC TGACCGTTGA CGGGCGGTGG GGAACGCCGG ATTCGGTCAC GCAGGGCACC GCTCCGATGA CGCTCCCGTT CCTGATCGCC GCCTGGCTCC TGCGCGACCG TCCGACCGAG CCCGTGCGGC GGCCGGTGAT GGTGGACGAA CACGGCGGGG CAGTCGGCAA CGGGGCAGTC GGCAACAGGG CAGTCGGCAA CGGGACAGGC AGCAGCGACA CAGTGAACAG CGCTGCGCGC CAAGCGATGC TGGTCCTCGG CGACGGCAGC GCCTCGCGCA CCCCGCAAGC GCCCGGCCAC TTCGACGAAC GCGCCGAACC CTACGACGCG GCAGTCGCCC GAGCCCTCGC CACCGCGGAC ACCGCGGCGC TCGCCGCCCT CGATCCGGAC CTGTCGCGCG CACTGCACGT CGCCGGGCTC CCCGCCTGGA AGCTCCTCGC CGACGCGGCG ACCGCATCAG GAGTCGAATA CGACGCCGAG CTGCTCTACG ACGAAGCGCC CTACGGCGTC GGCTACTTCG TCGCCACCTG GCTCGCTCGT TGA
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Protein sequence | MLIAAAVVPH PPVLVPEVAQ GFSPDLDTLR SACETAVGRL YAAGADEVLI VGAGPGQGDD VAARGDFRAY GVDLTVDGRW GTPDSVTQGT APMTLPFLIA AWLLRDRPTE PVRRPVMVDE HGGAVGNGAV GNRAVGNGTG SSDTVNSAAR QAMLVLGDGS ASRTPQAPGH FDERAEPYDA AVARALATAD TAALAALDPD LSRALHVAGL PAWKLLADAA TASGVEYDAE LLYDEAPYGV GYFVATWLAR
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