| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1617 |
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| Symbol | |
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| ID | 8332960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1836985 |
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| End bp | 1838514 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954767 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_003112379 |
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| Protein GI | 256390815 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00553824 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0299379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA CCGCGACCGA CAAGACCTAC ATCGTCCGCA CCTACGGCTG CCAGATGAAC
GTCCACGACT CCGAACGCCT CTCCGGCCTG CTCGAGGGCG CCGGCTACGT GCGCGCGGCC
GATGGTGCCG GCGAGGCGGA CGTGGTGGTG CTCAACACCT GCGCGGTGCG GGAGAACGCC
GACAACCGGC TCTACGGCAA CCTGGGGCAC CTGGCCTCGG TGAAGGCCGG GCGGCCTGGG
ATGCGGATCG CGGTCGGGGG GTGTCTGGCG CAGAAGGACC GCGGGGAGAT CACGCGGCGG
GCGCCGTGGG TCGACGTGGT GTTCGGGACG CACAACATCG GGTCGCTGCC GGTGCTGCTG
GAGCGGGCGC GGGTGCGGGA CGAGGCCCAG GTGGAGATCC TGGAGTCGCT CGACGTGTTC
CCCTCCACGC TGCCGACGCG GCGGGAGTCG GCGTACGCGG CGTGGGTCAG CGTGTCGGTC
GGGTGCAACA ACACCTGCAC CTTCTGCATC GTGCCGGCGC TGCGCGGCAA GGAGAAGGAC
CGGCGGCCCG GCGAGATCCT GTCGGAGATC GAGGCACTGG TCGCCGAGGG CGTGTGCGAG
GTGACGCTGC TCGGGCAGAA CGTCAACGCG TACGGGTCGG AGTTCGGAGA CCGCGAGGCG
TTCGCGAAGC TGCTGCGCGC GTGCGGGCAG ATCGAGGGTC TGGAGCGGGT GCGCTTCACC
TCGCCGCACC CCCGGGACTT CACCGACGAC GTGATCGCGG CGATGGCCGA GACGCCGAAC
GTCATGCCCC AGCTGCACAT GCCGCTGCAG TCCGGCTCGG ACACGGTGCT GCGCGCGATG
CGCCGCTCCT ACCGGCAGGA CCGCTACCTG GGCATCATCG AGCGGGTCCG CGCGGCGATG
CCCGACGCGG CGATCACGAC CGACATCATT GTCGGCTTCC CCGGGGAGAC CGAGGAAGAC
TTCGAGCAGA CGATGCACGT CGTGCGCCAG GCGCGGTTCT CGGCGGCGTT CACCTTCCAG
TACTCCAAGC GGCCCGGCAC GCCGGCGGCC ACGATGGAGG AGCAGGTGCC CAAGGCGGTC
GTGCAGGCGC GGTACGAGCG GTTGGTCGCG CTGCAGGAGG AGATCTCCTG GGAGGAGAAC
AAGAAGCAGG TCGGGCGGAC CGTCGAGCTG CTGGTCGCCG AGGGCGAGGG ACGCAAGGAC
GGCGAGACCC GGCGGATGTC GGGGCGGGCT CCGGACAACC GGCTGGTGCA CTTCGCCGTC
GGGGACACCG CGGCCGCCGA CCTGCCGCGT CCCGGCGACA TGGTCTCGGT GGAGGTCACC
TACGCCGCGC CGCACCACCT GAACGCCGAC GGTCCGGACG GCGCGAGCGC TATCAAGGCC
CTGCGACGTA CCCGGTCCGG GGACGCTTGG CAGGCTCGGC AGGAGCAGCC GGAGTCCGAG
CGGCGCGCGG CGGCCGTCAC GCTGGGGATG CCGTCGATCG GCAAGCCGGC GGTGTCGGCG
GAGGCGGAAA GTGCTTGCGG CGTCTGCTGA
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| Protein sequence | MPDTATDKTY IVRTYGCQMN VHDSERLSGL LEGAGYVRAA DGAGEADVVV LNTCAVRENA
DNRLYGNLGH LASVKAGRPG MRIAVGGCLA QKDRGEITRR APWVDVVFGT HNIGSLPVLL
ERARVRDEAQ VEILESLDVF PSTLPTRRES AYAAWVSVSV GCNNTCTFCI VPALRGKEKD
RRPGEILSEI EALVAEGVCE VTLLGQNVNA YGSEFGDREA FAKLLRACGQ IEGLERVRFT
SPHPRDFTDD VIAAMAETPN VMPQLHMPLQ SGSDTVLRAM RRSYRQDRYL GIIERVRAAM
PDAAITTDII VGFPGETEED FEQTMHVVRQ ARFSAAFTFQ YSKRPGTPAA TMEEQVPKAV
VQARYERLVA LQEEISWEEN KKQVGRTVEL LVAEGEGRKD GETRRMSGRA PDNRLVHFAV
GDTAAADLPR PGDMVSVEVT YAAPHHLNAD GPDGASAIKA LRRTRSGDAW QARQEQPESE
RRAAAVTLGM PSIGKPAVSA EAESACGVC
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