Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1606 |
Symbol | |
ID | 8332949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1823114 |
End bp | 1823938 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644954756 |
Product | Alginate lyase 2 |
Protein accession | YP_003112368 |
Protein GI | 256390804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.139119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.151509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGAG GCGCATCACC CAAGCTCGTC GCCGCGGCCA CCGCGGCCAC CGTGGTCCTC ACCGGCGCCG TGATCGCCGC GTCGTCGACG GCCGCCCAGG CCGCCCCGGC CGTGACCCGG GCCGCCGCCC CCAAGCTCAG CACCACCGTC GCGCCGGGCG GCAACTTCAA CCTGTCCGTC TGGGAGCTCC AGGAGCCCGT GGGCAGCCCC GGCTCGCCCC GCACGATCCC CTCCGCGCAG CTGCAGGGCG CCAAGGGGTA TCAGGACTCG TACTTCTACA CCGACACCAA AGACGGCGCC ATGACCTTCT GGGCGCCGGA GAAGGGCGTC ACCACGCCCA ACTCCAACTA CGCCCGCTCC GAGCTGCGCG AGATGAACAC CGACGGCAGC TCCGCGGACT GGAAGCTGGC CGGCTCCCAC CAACTGCAGG CCACCTTGCG CGTGGACTCG GTGACCGACC ACGTCTGCGT GGGCCAGATC CACCTGGGCA CCGGCGGCTC CTCCACCAAG CCGCTCGTCG AGCTGTACTA CTACAAGAAC GGCAACATCG TGCTCGGCGA GGAGAACTCG CCCTCCGGCG GCCAGACGAC GCACCAGATC GCCAACGTCC CGGTCGGCAC GCAGTGGAGC TACACCATCG CCGTCTCCGG CGGGAACACC ATCAACCTGA CGGTGAACGG CAAGACCACG AAGTACGCGA TCCCGTCGTC CTTCAACGCC TACCACATGT ACTTCAAGGC CGGTTCCTAC AACCAGTCCT CGTCGAGCAG CACCACGAAG GGGGCGCGCG TCGCCTTCTA CGCGCTGACC GTGAAGCACA GCTGA
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Protein sequence | MLRGASPKLV AAATAATVVL TGAVIAASST AAQAAPAVTR AAAPKLSTTV APGGNFNLSV WELQEPVGSP GSPRTIPSAQ LQGAKGYQDS YFYTDTKDGA MTFWAPEKGV TTPNSNYARS ELREMNTDGS SADWKLAGSH QLQATLRVDS VTDHVCVGQI HLGTGGSSTK PLVELYYYKN GNIVLGEENS PSGGQTTHQI ANVPVGTQWS YTIAVSGGNT INLTVNGKTT KYAIPSSFNA YHMYFKAGSY NQSSSSSTTK GARVAFYALT VKHS
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