Gene Caci_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1600 
Symbol 
ID8332943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1813821 
End bp1814504 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID644954750 
Producthypothetical protein 
Protein accessionYP_003112362 
Protein GI256390798 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.988724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.695323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC ACGTACATCA GGGCTCGGCG ACGAAGCGTG CGCTGGTCGT CCGCGGCGGC 
TGGGACGGCC ACGTCCCGGT CCCCGCGAGC GACCGGTACG CCGCCGCGCT CAAGGACGAC
GGCTACGACG TCACCGTCTC CGACACTTTG GACAGCTACC TGGAGGAGGA CCTGCTGGCC
GCCACCGATC TGATCGTCCA GTGCTGGACG ATGGGGCAGA TCAGCGGCGA GCAGACCACC
GGTCTGCTGC GGGCGGTGCG CGCCGGGACC GGGTTCGCCG GCTGGCACGG CGGCGTCATC
GACGCCTTCC GCGGCGAGAC CCGCTACCAG CTGATGACCG GCGGGCAGTT CGTGCACCAC
CCGCGCGAGT TCACCACGTA CGAGGTGCAC GCGCGACCCG AGCGCGCCGA CCATCCGATC
ATGGCCGGGA TCGCGCCGTT CACCGTCACC ACCGAGCAGT ACTACCTGCA CATGGACCCG
GCGGTGGAGG TCCTGGCGGT CACCGACTAC GCCGAGGACC CGGACCATCC CGAACTCGCC
GGCGTCGTCA TGCCGGTCAC CTGGACCCGG CAGTGGGGCG CGGGGCGGGT CTTCGTCACC
GCGGTCGGAC ACCGGGTCGC CGACCTGGAG GTACCCGAGG TGGACGAGAT GATCAGGAGG
GGCATGGCAT GGGCGACACG GTGA
 
Protein sequence
MTEHVHQGSA TKRALVVRGG WDGHVPVPAS DRYAAALKDD GYDVTVSDTL DSYLEEDLLA 
ATDLIVQCWT MGQISGEQTT GLLRAVRAGT GFAGWHGGVI DAFRGETRYQ LMTGGQFVHH
PREFTTYEVH ARPERADHPI MAGIAPFTVT TEQYYLHMDP AVEVLAVTDY AEDPDHPELA
GVVMPVTWTR QWGAGRVFVT AVGHRVADLE VPEVDEMIRR GMAWATR