Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1600 |
Symbol | |
ID | 8332943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1813821 |
End bp | 1814504 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954750 |
Product | hypothetical protein |
Protein accession | YP_003112362 |
Protein GI | 256390798 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.988724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.695323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC ACGTACATCA GGGCTCGGCG ACGAAGCGTG CGCTGGTCGT CCGCGGCGGC TGGGACGGCC ACGTCCCGGT CCCCGCGAGC GACCGGTACG CCGCCGCGCT CAAGGACGAC GGCTACGACG TCACCGTCTC CGACACTTTG GACAGCTACC TGGAGGAGGA CCTGCTGGCC GCCACCGATC TGATCGTCCA GTGCTGGACG ATGGGGCAGA TCAGCGGCGA GCAGACCACC GGTCTGCTGC GGGCGGTGCG CGCCGGGACC GGGTTCGCCG GCTGGCACGG CGGCGTCATC GACGCCTTCC GCGGCGAGAC CCGCTACCAG CTGATGACCG GCGGGCAGTT CGTGCACCAC CCGCGCGAGT TCACCACGTA CGAGGTGCAC GCGCGACCCG AGCGCGCCGA CCATCCGATC ATGGCCGGGA TCGCGCCGTT CACCGTCACC ACCGAGCAGT ACTACCTGCA CATGGACCCG GCGGTGGAGG TCCTGGCGGT CACCGACTAC GCCGAGGACC CGGACCATCC CGAACTCGCC GGCGTCGTCA TGCCGGTCAC CTGGACCCGG CAGTGGGGCG CGGGGCGGGT CTTCGTCACC GCGGTCGGAC ACCGGGTCGC CGACCTGGAG GTACCCGAGG TGGACGAGAT GATCAGGAGG GGCATGGCAT GGGCGACACG GTGA
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Protein sequence | MTEHVHQGSA TKRALVVRGG WDGHVPVPAS DRYAAALKDD GYDVTVSDTL DSYLEEDLLA ATDLIVQCWT MGQISGEQTT GLLRAVRAGT GFAGWHGGVI DAFRGETRYQ LMTGGQFVHH PREFTTYEVH ARPERADHPI MAGIAPFTVT TEQYYLHMDP AVEVLAVTDY AEDPDHPELA GVVMPVTWTR QWGAGRVFVT AVGHRVADLE VPEVDEMIRR GMAWATR
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