Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1594 |
Symbol | |
ID | 8332937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1802509 |
End bp | 1804773 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954744 |
Product | ROK family protein |
Protein accession | YP_003112356 |
Protein GI | 256390792 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.630242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGAGG TGCCCTCCTC CGGCGCGGCG CCGGGTGCCG ACGGGCACTC GGTGCTGCGC CGGTGGGCCG ACGGCGACGG TCAGCAGGCG TTGCGCGCGT CGATCGTGCT GCTGGCCGCC GAGGGACTGC GCAACGCCGA CATCGCCCGG CGCCTGGGCG TCTCCCGGCA GACGGTCAGC ACCTGGCGCA AGCGCTACGC CGTCGAAGGA CTCGACGGCC TGCTGGACCG GGCCCGCACC GGACGCCCGT CGGCGGTGGA CGAGGGCGAG ATCGTCGCCA GCATCCTCAC CTCCACCCCG GACGCCCGCA CCTCGCGGAT GGTCGCGCGC CGCCTCGGCT GCTCGCACAC CGTCGTCGCC GAGACCCGGC ACCGCTGGAA CCTGACCGGC AGCCGGCTGA CCGTGCCGCA GATCCCGGTG ATCCCCGCGC TGGAGCCGAG CGATCTGTGG CCGGTCGGGC TGCATTTGGA CGCCGGCTGC ACGGTTCTGG TGCTCGCCGG ACGCTCGGTC GCGACAGTCC CGCCGCCCTC GGCCGAACCA GCCGTCGATC CCTACGCGCT GGCAGCTGTC GGGAACGCAC TGACCGAGGC GACGGCTGCC GCGCAGGCCG AAGCCGCGGC GCCCGCGCCG ATCGCCGGCC CAGGCCCTGG CTTCGGATCC GGCTCTGTCT CTACCTCTGG GCTCAGTTCC GGACTCACCT CCGGGCTCAA CTCCGGCACC CACCACGACA CCGATTTCGT CGGTCCCTTC CTGGACGCCG TCCGCCGCAC CCACCCGCTG CCGGAACTGC ACGCCGTGAT CCTGCGCGCC GAACCGTCCA GCACGCGGCC GTTACAGACC CAGATCGCCG AGCGCTGCTC GCATCTGGGG ATCACCGTCC ACCAGCCGCC GGAGCGGACC ACCGGGCTCT CGTTCACCCG CGCCGTGCTG GCCCTGGACG CCGCCCGGCA TCCGGAGTCC TCCACCCGCG TGCTGCTCGA CGTCGCCTCG GTCCTGTCGC GCTACGTCGA CGGCCCGGAA ACGGCGCGGG TCCGCTGGAT CCGCGAACCG CTCCCGGCAC CGTCCGCCGC GCCTCCGACG CTCCCGCTGC CCTCACCGGG CCATTCCGGT CCGGGGACCG GCGGCGGAGC GAACCAGATC GACCTCGGCT CGTTCAACGA GTGCGTGGTG ATCGAGACGG TGCGGCTCGC CGGCCGGATC ACCCGCGGCG AGATCGCCGA GCGCACCCGG CTCACGCAAC AGTCGGTGTC CCGCATCGCG CGCTCGCTGA TCCAGCGCGG ACTGCTCGTG GAGGAGCGGC AGCGCCATTC CGCCGTCGGC AAGCCGAGCA GCCCGGTCCG GCTGCGGGAC GGCGCGGCGC ACGCATTGGG CATCCACATC GACCCGCATG TGCTGACCGC GGTGCTGGTC GACCTCTCGG GGCGGGTCGT CGCCAGGCGG TCCGAACCGA TCACCTCCGA CCCCCGGCCG GGCGCGGTCG TGACCCAGAT CGCCGACCTG GGCGAGACAG TGCTCGAACA AGCCGGGCAC GGCCGGTGGG AGGAGGGGTT CCTCGGCATC GGCGTGGCGA CCCCCGGTCC GGTGGACACC GTCTCCGGGA CGGTGCTCGA TCCGCCGCTG ATGTCGGTGC TGCGCGACGT CCCGCTGCGC ACCTTGCTGG AGCGCCGGTT CTCCTGCCGC ATCGTGATCG AGAAGGACTG CTCGGCGGCG GCGGTCGGCG AGCGCTGGAT CGGCCGGGAC AGCCGCGCGT GCGACTTCGT GTATCTGTAT CTGGGCACCG GCGTCGGGAC CGGGCTGTTC CTCAACGGCG ACCTGTATCG CGGACTGACC GCGAACGCCG GCGAGTTCGG CCAGCTCTGC GCGGTCACGC TGGGCCGCTT CGACGAGTCC GGACGGCCGG AGATCCTCCC GGAGTGCAAC CCGGGGAGCT ACGCGCCGGC GGAGCATCCC TCGCGCGCGA TCGGGCGGCA GCGCTCGAAG CTGACCGTGC AGCAGGCGGC GAAGGCGGTC AGCCGGGGCG TGCTGTCGGT GATCGACCTG CTGGACGTCG GGCTGGTCGT GGTCGGCGGA CCGTTCTTCA CCGGCGAGGT CGCCGACGTC TGGCTCACCG AGATCGAGCA CGCGGTCAAC GCCTACCCGA CCGCGCGCCG CTTGCGCCGC ATCCGCGTCG AGCGCTCGGT GAACAGCAGC GAGGCGGTCG CGGTCGGCGC GGCGTCGACG ATCTTCCACT CCACGTTCAC GCCGAGGCTG CGGCGCTCGC CCTGA
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Protein sequence | MGEVPSSGAA PGADGHSVLR RWADGDGQQA LRASIVLLAA EGLRNADIAR RLGVSRQTVS TWRKRYAVEG LDGLLDRART GRPSAVDEGE IVASILTSTP DARTSRMVAR RLGCSHTVVA ETRHRWNLTG SRLTVPQIPV IPALEPSDLW PVGLHLDAGC TVLVLAGRSV ATVPPPSAEP AVDPYALAAV GNALTEATAA AQAEAAAPAP IAGPGPGFGS GSVSTSGLSS GLTSGLNSGT HHDTDFVGPF LDAVRRTHPL PELHAVILRA EPSSTRPLQT QIAERCSHLG ITVHQPPERT TGLSFTRAVL ALDAARHPES STRVLLDVAS VLSRYVDGPE TARVRWIREP LPAPSAAPPT LPLPSPGHSG PGTGGGANQI DLGSFNECVV IETVRLAGRI TRGEIAERTR LTQQSVSRIA RSLIQRGLLV EERQRHSAVG KPSSPVRLRD GAAHALGIHI DPHVLTAVLV DLSGRVVARR SEPITSDPRP GAVVTQIADL GETVLEQAGH GRWEEGFLGI GVATPGPVDT VSGTVLDPPL MSVLRDVPLR TLLERRFSCR IVIEKDCSAA AVGERWIGRD SRACDFVYLY LGTGVGTGLF LNGDLYRGLT ANAGEFGQLC AVTLGRFDES GRPEILPECN PGSYAPAEHP SRAIGRQRSK LTVQQAAKAV SRGVLSVIDL LDVGLVVVGG PFFTGEVADV WLTEIEHAVN AYPTARRLRR IRVERSVNSS EAVAVGAAST IFHSTFTPRL RRSP
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