Gene Caci_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1594 
Symbol 
ID8332937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1802509 
End bp1804773 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content73% 
IMG OID644954744 
ProductROK family protein 
Protein accessionYP_003112356 
Protein GI256390792 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.630242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGG TGCCCTCCTC CGGCGCGGCG CCGGGTGCCG ACGGGCACTC GGTGCTGCGC 
CGGTGGGCCG ACGGCGACGG TCAGCAGGCG TTGCGCGCGT CGATCGTGCT GCTGGCCGCC
GAGGGACTGC GCAACGCCGA CATCGCCCGG CGCCTGGGCG TCTCCCGGCA GACGGTCAGC
ACCTGGCGCA AGCGCTACGC CGTCGAAGGA CTCGACGGCC TGCTGGACCG GGCCCGCACC
GGACGCCCGT CGGCGGTGGA CGAGGGCGAG ATCGTCGCCA GCATCCTCAC CTCCACCCCG
GACGCCCGCA CCTCGCGGAT GGTCGCGCGC CGCCTCGGCT GCTCGCACAC CGTCGTCGCC
GAGACCCGGC ACCGCTGGAA CCTGACCGGC AGCCGGCTGA CCGTGCCGCA GATCCCGGTG
ATCCCCGCGC TGGAGCCGAG CGATCTGTGG CCGGTCGGGC TGCATTTGGA CGCCGGCTGC
ACGGTTCTGG TGCTCGCCGG ACGCTCGGTC GCGACAGTCC CGCCGCCCTC GGCCGAACCA
GCCGTCGATC CCTACGCGCT GGCAGCTGTC GGGAACGCAC TGACCGAGGC GACGGCTGCC
GCGCAGGCCG AAGCCGCGGC GCCCGCGCCG ATCGCCGGCC CAGGCCCTGG CTTCGGATCC
GGCTCTGTCT CTACCTCTGG GCTCAGTTCC GGACTCACCT CCGGGCTCAA CTCCGGCACC
CACCACGACA CCGATTTCGT CGGTCCCTTC CTGGACGCCG TCCGCCGCAC CCACCCGCTG
CCGGAACTGC ACGCCGTGAT CCTGCGCGCC GAACCGTCCA GCACGCGGCC GTTACAGACC
CAGATCGCCG AGCGCTGCTC GCATCTGGGG ATCACCGTCC ACCAGCCGCC GGAGCGGACC
ACCGGGCTCT CGTTCACCCG CGCCGTGCTG GCCCTGGACG CCGCCCGGCA TCCGGAGTCC
TCCACCCGCG TGCTGCTCGA CGTCGCCTCG GTCCTGTCGC GCTACGTCGA CGGCCCGGAA
ACGGCGCGGG TCCGCTGGAT CCGCGAACCG CTCCCGGCAC CGTCCGCCGC GCCTCCGACG
CTCCCGCTGC CCTCACCGGG CCATTCCGGT CCGGGGACCG GCGGCGGAGC GAACCAGATC
GACCTCGGCT CGTTCAACGA GTGCGTGGTG ATCGAGACGG TGCGGCTCGC CGGCCGGATC
ACCCGCGGCG AGATCGCCGA GCGCACCCGG CTCACGCAAC AGTCGGTGTC CCGCATCGCG
CGCTCGCTGA TCCAGCGCGG ACTGCTCGTG GAGGAGCGGC AGCGCCATTC CGCCGTCGGC
AAGCCGAGCA GCCCGGTCCG GCTGCGGGAC GGCGCGGCGC ACGCATTGGG CATCCACATC
GACCCGCATG TGCTGACCGC GGTGCTGGTC GACCTCTCGG GGCGGGTCGT CGCCAGGCGG
TCCGAACCGA TCACCTCCGA CCCCCGGCCG GGCGCGGTCG TGACCCAGAT CGCCGACCTG
GGCGAGACAG TGCTCGAACA AGCCGGGCAC GGCCGGTGGG AGGAGGGGTT CCTCGGCATC
GGCGTGGCGA CCCCCGGTCC GGTGGACACC GTCTCCGGGA CGGTGCTCGA TCCGCCGCTG
ATGTCGGTGC TGCGCGACGT CCCGCTGCGC ACCTTGCTGG AGCGCCGGTT CTCCTGCCGC
ATCGTGATCG AGAAGGACTG CTCGGCGGCG GCGGTCGGCG AGCGCTGGAT CGGCCGGGAC
AGCCGCGCGT GCGACTTCGT GTATCTGTAT CTGGGCACCG GCGTCGGGAC CGGGCTGTTC
CTCAACGGCG ACCTGTATCG CGGACTGACC GCGAACGCCG GCGAGTTCGG CCAGCTCTGC
GCGGTCACGC TGGGCCGCTT CGACGAGTCC GGACGGCCGG AGATCCTCCC GGAGTGCAAC
CCGGGGAGCT ACGCGCCGGC GGAGCATCCC TCGCGCGCGA TCGGGCGGCA GCGCTCGAAG
CTGACCGTGC AGCAGGCGGC GAAGGCGGTC AGCCGGGGCG TGCTGTCGGT GATCGACCTG
CTGGACGTCG GGCTGGTCGT GGTCGGCGGA CCGTTCTTCA CCGGCGAGGT CGCCGACGTC
TGGCTCACCG AGATCGAGCA CGCGGTCAAC GCCTACCCGA CCGCGCGCCG CTTGCGCCGC
ATCCGCGTCG AGCGCTCGGT GAACAGCAGC GAGGCGGTCG CGGTCGGCGC GGCGTCGACG
ATCTTCCACT CCACGTTCAC GCCGAGGCTG CGGCGCTCGC CCTGA
 
Protein sequence
MGEVPSSGAA PGADGHSVLR RWADGDGQQA LRASIVLLAA EGLRNADIAR RLGVSRQTVS 
TWRKRYAVEG LDGLLDRART GRPSAVDEGE IVASILTSTP DARTSRMVAR RLGCSHTVVA
ETRHRWNLTG SRLTVPQIPV IPALEPSDLW PVGLHLDAGC TVLVLAGRSV ATVPPPSAEP
AVDPYALAAV GNALTEATAA AQAEAAAPAP IAGPGPGFGS GSVSTSGLSS GLTSGLNSGT
HHDTDFVGPF LDAVRRTHPL PELHAVILRA EPSSTRPLQT QIAERCSHLG ITVHQPPERT
TGLSFTRAVL ALDAARHPES STRVLLDVAS VLSRYVDGPE TARVRWIREP LPAPSAAPPT
LPLPSPGHSG PGTGGGANQI DLGSFNECVV IETVRLAGRI TRGEIAERTR LTQQSVSRIA
RSLIQRGLLV EERQRHSAVG KPSSPVRLRD GAAHALGIHI DPHVLTAVLV DLSGRVVARR
SEPITSDPRP GAVVTQIADL GETVLEQAGH GRWEEGFLGI GVATPGPVDT VSGTVLDPPL
MSVLRDVPLR TLLERRFSCR IVIEKDCSAA AVGERWIGRD SRACDFVYLY LGTGVGTGLF
LNGDLYRGLT ANAGEFGQLC AVTLGRFDES GRPEILPECN PGSYAPAEHP SRAIGRQRSK
LTVQQAAKAV SRGVLSVIDL LDVGLVVVGG PFFTGEVADV WLTEIEHAVN AYPTARRLRR
IRVERSVNSS EAVAVGAAST IFHSTFTPRL RRSP