Gene Caci_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1590 
Symbol 
ID8332933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1798624 
End bp1799205 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content72% 
IMG OID644954740 
Productisochorismatase hydrolase 
Protein accessionYP_003112352 
Protein GI256390788 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA CCACCATCGA CCCGAAGACC GCGCTGGTCG TCATCGACCT GCAGAACGGC 
ATCACCGCGA TGCCCGGCGC GCCGGTCCCG ACCCCCGACG TGATCAAGAA CTCCGTCGAG
CTGGCGCAGG CGTTCCGCGA GCGCGGCCTG CCGGTCGTGC TGGTCAACGT CACCTTCGCC
GAGGACGGCG CGGACGCCCT GCCCGGCCGC ACCGACCAGC AGCGTCCGGC CGGGCAGATG
CCCGCGGGCT GGGACGCGGT CATCGCCGAC CTCGAGGGCC ACGCGAGCGA CATCCGCGTC
ACCAAGCGCA ACTGGTCCGC CTTCTACGGC ACCAACCTCG ACCTGCACCT GCGGCGCCGC
GGCGTCACGC AGATCGTGCT GACCGGGATC GCGACCAGCA TCGGCGTGGA GTCCACGGCG
CGCTTCGCGC ACGAGCACGG CTACCACGTC ACGATCGCCA CCGACGCGGT CACCGACTCC
AACGCCGAGG CGCACCTGAA CAGTGTGGAG CGCATCTTCC CGCGCCTGGC CGAGAACGGG
ACCACCGCGG AGATCCTCGC CGCGCTGCCG GCCGCCGGCT GA
 
Protein sequence
MAITTIDPKT ALVVIDLQNG ITAMPGAPVP TPDVIKNSVE LAQAFRERGL PVVLVNVTFA 
EDGADALPGR TDQQRPAGQM PAGWDAVIAD LEGHASDIRV TKRNWSAFYG TNLDLHLRRR
GVTQIVLTGI ATSIGVESTA RFAHEHGYHV TIATDAVTDS NAEAHLNSVE RIFPRLAENG
TTAEILAALP AAG