| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1578 |
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| Symbol | |
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| ID | 8332921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1781866 |
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| End bp | 1786680 |
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| Gene Length | 4815 bp |
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| Protein Length | 1604 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954728 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_003112340 |
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| Protein GI | 256390776 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGTA TGGCAGCGTC TATCCGAAAG GCAGGGTCCG CGGCCCTGAG CCACTTCCAC
CCGGCCACCC AGGCCTGGTT CACGGCCGCG TTCGCCGAGC CCACGACCGC TCAGGCCGGA
GCCTGGAACG CGCTCGCCGA GGAGAAGAAC GCCCTGGTCG TGGCGCCGAC CGGGTCCGGC
AAGACGCTCG CGGCGTTCCT GGCCGCGCTG GACCGGCTGG CCTTCGGCCC GCCGCCGAGC
GAGCCCAAGC GCCGCTGCCG CGTCCTGTAC GTCTCGCCGC TGAAGGCGCT GGCCGTCGAC
GTCGAGCGCA ACCTGCGCGC GCCGCTGGCC GGCCTGAAGC AGGCCGCCGC GCGCCTGGGC
CTGCCCGAGC CGGACGTCGA CATCGCGGTC CGCTCCGGCG ACACCCCGGC CGACCAGCGG
CGCAGATTCA TGACCAAGCC CTCGGACATC CTGATCACCA CCCCCGAGTC GCTGTTCCTG
CTCCTCACCT CCGCCGCCCG CGAGTCGCTG CGCGGCGTGG AGACGGTGAT CATCGACGAG
GTCCACGCGG TCGCCGGGAC CAAGCGCGGC TCCCACCTGG CCGTCTCCCT GGAGCGGCTG
GACGCGCTGC TGGAGCGGCC GGCGCGGCGG ATCGGGCTGT CGGCGACCGT GCGGCCGGCC
GAGACCGTCG CGCAGTTCCT CGGCGGTCCG CATCCGGTGC ACATCGTCGC GCCGAAGATC
GCCAAGACCT TCGACATCCG GGTCTCGGTG CCGGTCGAGG ACATGGGAGC GCTGGACACC
GACGACGGCG AGCTGGTCGC CGCCGACCAG ACCGGGCGCC GGCAGGTGTC GGTGTGGCCG
CATGTCGAGG CGGCGGTGGC GGACCTGATC GAGCGGCACC GCTCGACGAT CGTCTTCACC
AACTCCCGGC GGCTGGCCGA GCGGCTGACC GGCAAGCTGA ACGAGGCGCA CTGGGAGCGG
GTCACCGGCG GCACCGCCGG TTCCCCCGGT TCCCCCGGTT CCCCCGGTTC CGACCCCGAG
CGCGATGCTC GTGACCCTCT CGAGGAACCG CTGAGCGTGA AACAGGTGCT GGCAGCCTCG
CCGCCGGCGG AAGTGATGGC TCAGGCCGGG CAGGTCTCCG GCGCCCCGCC GGTCCTGGCG
CGCGCGCACC ACGGCTCGGT GTCCAAGGAG CAGCGCGCCG ACATCGAGGA GGCGCTGAAG
GCGGGCAACC TTCCGGCCGT CGTCGCCACC TCCAGCCTGG AGCTGGGCAT CGACATGGGC
GCGGTGGACC TGGTGATCCA GGTGGAGTCG CCGCCGTCGG TGGCTGCCGG GCTGCAGCGC
GTCGGGCGCG CCGGCCACCA GGTCGGCGCG ATCTCGCGCG GCGTCATCTT CCCCAAGTAC
CGGGGCGACC TGGTGCAGTC GGCGGTGGTG GCCGAGCGGA TGGCGTCGGG GTCCATCGAG
GCGCTGAAGG TCGTGCGCAA CCCGCTGGAC GTACTGGCCC AGCAGATCAT CGCGATGGTC
GCGATCGAGG ACTGGCCGGC CGCCGATCTC ATCGCCCTGA TCCGCCGCGC GATGCCGTTC
ACCGCGCTGC CGGACTCGGC CTACGAATCA GTGCTCGACC TGCTCTCCGG CCGCTACCCC
TCGGACGAGT TCGCCGAGCT GAAGCCGCGC ATCGTCTGGG ACCGCGTCGA GGGCAAGCTC
TCGGCCCGTC CCGGCGCGCA GCGGCTGGCC GTCACCTCCG GCGGCACCAT CCCGGACCGC
GGCTACTTCG GGGTCTTCCT CGCCGGCGCG AAGGAGGGCG CCAAGCGGGT CGGCGAGCTG
GACGAGGAGA TGGTCTACGA GTCGCGGGTC GGTGACGTGT TCACGCTGGG CTCCTCCTCC
TGGCGCATCG AGGACATCAC GCACGACCGC GTCCTGGTCT CCCCCGCCCC GGGCATGCCG
GGCAAGCTGC CGTTCTGGCA CGGCGACGCC CTGGGCCGTC CGCTGGAGCT GGGCCGCGCG
CTCGGCGGCT TCCTGCGCGA GCTGGGCAAG GCCGACGAAG CGGTGTCGAA GGCCCGGCTG
AAGGAGTCCG GCCTGGACGA ATGGGCCGCC GACAACCTGC TGTCCTACCT GCGCGAGCAG
AAGCAGGCCA CCGGCCGTAT CCCCGACGAC CGCACCATCG TGGTCGAGCG CACCCGCGAC
GAACTCGGCG ACTGGAAGAT CCTGGTCCAC TCCCCCTTCG GCGCCCAGGT GCACGCCCCC
TGGGCTCTGG CCATCGGCAC CCGCCTGCGC GAGCGCTACG GCTTGGACGC GCAGGTGATG
CACGCCGACG ACGGCATAGT GCTGCGCCTG CCGGACACCG ACGCGGCCGA CCCGACCACC
GAAACCCTGG GCCTGCTGTT CGGCTCCGAC GAGATCGAGG AGATCGTCAC CGGCGAGATC
GGCGGCTCGG CGCTGTTCGC CTCCCGCTTC CGCGAGTGCG CCGGTCGCGC GCTCCTTCTG
CCGCGCACGC GCCCGGGCAA GCGCACGCCC CTGTGGCAGC AGCGGCAGCG GTCGGCGCAG
CTGCTGTCGG TGGCGGCGAA GCACGCGAGC TTCCCGATCG TGCTGGAGGC CGTGCGCGAG
GTGCTGCAGG ACGTGTACGA CGTGCCGGGG CTGATCGAGC TGTGCCGCGA CATCGAGGCG
CGCAAGGTGC GGATCGTCGA GGTGGAGACC GCGCAGCCCT CCCCGTTCGC CCGCTCCCTG
CTGTTCGGCT ACATCGCGCA GTTCATGTAC GAGGGCGACT CCCCGCTGGC CGAGCGCCGC
GCCGCCGCGC TGTCGCTGGA TCCGGCGCTG CTGGCCGAAC TCCTGGGCCA GACCGGCCTG
CGCGACCTGC TGGACCCCGA CATCCTCACG GCGCTGGAGG AGGAGCTTCA GTACCTGACG
CCGAACCGCC GCGCCCGCGA TGGCGAGGAT GCCGCCGACT TGCTGCGTCT GCTCGGTCCG
CTGTCGACGG CCGAGGCTGC GGCGCGCGGC ATCGAAGCGG CGTGGCTGGT GGACCTGGAG
AGCGCGCGCC GGATCATCAG GGTCCGTATC GCCGGCGAGG AACGCTGGGC TGCGATCGAG
GATGCGGGGC GCTTGCAAGA CGCTTTAGGC GTGCCACTGC CTGTGGGCAT CCCGGAGGCG
TTCACGGCTG TCGTCGCGGA CCCGCTCGGC GACTTGGTCG CGCGCTACGC GCGTACGCAC
GGCCCGTTCA ACGCCATCGA GCCCGCGACT CGCTTCGGTA TCCCGGCGTC GTCGGTCATC
GCAGCCTTGG AACGTCTCGC GGCTGCGGGC CGTGTGTTGT CCGGGGAGTT CCGCCCCGGT
GGCAGCGGCA TGGAGTGGTG CGACGCCGAG GTGCTGCGCC GCGTGCGCCG CCGGACGATG
GCCGCGCTGC GCAAGGAGGC TGAGCCGGTA CAGCCGCGGG CGCTGGCGAT GCTGCTGCCG
GCGTGGCAGT CGGTCGGGCG CGCTGCTGCG TCCCCGTTGC GCGGCACGGA CGGCGTTCTC
CGGGTAGTGG AGCAATTAGC CGGTGCAGTG GTCCCTGCCT CCGCCTTGGA ACGCCTGATC
CTGCCCTCCC GGATCGTGGA CTACTCCCCG ACCATGCTCG ACGAGCTGAC GTCGTCCGGC
GAAGTGGTGT GGGCCGGCGC CGGATCGCTG GCAGGCGACG ACGGCTGGGT GACCCTGTGC
CCCGCCGAAC TCGCGCCCCT GCTCCTTCCC GAACCCTCCG AAGCCCTGGA CCCCGGCCCA
GTGCACGAGG CGATCCTCGA AGCCCTCGGC GAAGACGCGG CTCTGTTCCT GCGCGGAATC
GTCGCGCGCG TCAGCGACAC GTTCTCCTCT GGCGAAGTGT TGTCAGGGCT CTGGGACCTC
CTGTGGGCCG GCTACATCAC CAACGACACC CTGGCACCCC TGCGCGGCCT CCTCGGCTCC
GGCAAGAGCG CTCACAAGAC CCGCCGTCCG ACTCCCCGCG GCCGCTACGC GCGCTTCGGC
GTGGCAGCGG TAGCGGCGGA CCAGAACGCC TCAGCCGCCG TGAGCCCCTC CGCCGCCGGC
CGCTGGTCCC GCCTCGCCCC GCGCATCGCC GACCCGACCC GCCGCGCCCA CCTGCTCGGC
GAGGTCCTCC TGGACCGCTA CGGCGTAGTG ACCCGCGGCT CAGTGATGAG CGAGCACATC
CCCGGCGGCT ACGCGGGCGT CTACTCGGTC CTCTCCGCCT ACGAGGAAGC CGGCCGCACC
CGCCGCGGCT ACTTCGTCGA AGGCCTCGGC GCCGCCCAGT TCGCCGCCGA AGGCGCCGTC
GACCGCCTCC GCTCCCTGGC AGCAGCCCTC GAAACCCTCC AGAACCGCGA ACACGAAGCC
ACCGGCGCAG CCCTCGACGA CAGCGTCCAC AAACTCATGG GCACCCCCCA CGAGTACACC
CCCCGCCGCC CCAAAAAAGA CCCCGAACGC ATCGGCGCCC TAGTCCTAGC CGCCACCGAC
CCCGCCAACG CCTACGGCGC CGCCCTCCCC TGGCCCACCC GCCCCACCCC CGAAGACCCC
AACGCCACCA CCAACACCGG CCACAAGCCC GGCCGCAAAG CAGGCGCCCT AGTAGTCCTC
GTAGACGGCG CCCTAACCCT CTACGTCGAA CGCGGCGGCC GCACCCTCCT CTCCTGGACC
GAAGACCCAG CGGCCCTCCA ACCAGCAGCC GACGCCCTAG CCCTCACCGT CCGAGACGGC
TGGCTCGGCA AACTGACCGT CTCCAAAACC GACGGCGAAG ACGTCCTCTA CGCCGGCAAA
ACCTCCCCCC TGGCCCAAGC CCTCGCAGCC GCCGGCTTCC GCACCACCCC CTCAGGCCTC
CGCCTCCGCA GCTAG
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| Protein sequence | MDRMAASIRK AGSAALSHFH PATQAWFTAA FAEPTTAQAG AWNALAEEKN ALVVAPTGSG
KTLAAFLAAL DRLAFGPPPS EPKRRCRVLY VSPLKALAVD VERNLRAPLA GLKQAAARLG
LPEPDVDIAV RSGDTPADQR RRFMTKPSDI LITTPESLFL LLTSAARESL RGVETVIIDE
VHAVAGTKRG SHLAVSLERL DALLERPARR IGLSATVRPA ETVAQFLGGP HPVHIVAPKI
AKTFDIRVSV PVEDMGALDT DDGELVAADQ TGRRQVSVWP HVEAAVADLI ERHRSTIVFT
NSRRLAERLT GKLNEAHWER VTGGTAGSPG SPGSPGSDPE RDARDPLEEP LSVKQVLAAS
PPAEVMAQAG QVSGAPPVLA RAHHGSVSKE QRADIEEALK AGNLPAVVAT SSLELGIDMG
AVDLVIQVES PPSVAAGLQR VGRAGHQVGA ISRGVIFPKY RGDLVQSAVV AERMASGSIE
ALKVVRNPLD VLAQQIIAMV AIEDWPAADL IALIRRAMPF TALPDSAYES VLDLLSGRYP
SDEFAELKPR IVWDRVEGKL SARPGAQRLA VTSGGTIPDR GYFGVFLAGA KEGAKRVGEL
DEEMVYESRV GDVFTLGSSS WRIEDITHDR VLVSPAPGMP GKLPFWHGDA LGRPLELGRA
LGGFLRELGK ADEAVSKARL KESGLDEWAA DNLLSYLREQ KQATGRIPDD RTIVVERTRD
ELGDWKILVH SPFGAQVHAP WALAIGTRLR ERYGLDAQVM HADDGIVLRL PDTDAADPTT
ETLGLLFGSD EIEEIVTGEI GGSALFASRF RECAGRALLL PRTRPGKRTP LWQQRQRSAQ
LLSVAAKHAS FPIVLEAVRE VLQDVYDVPG LIELCRDIEA RKVRIVEVET AQPSPFARSL
LFGYIAQFMY EGDSPLAERR AAALSLDPAL LAELLGQTGL RDLLDPDILT ALEEELQYLT
PNRRARDGED AADLLRLLGP LSTAEAAARG IEAAWLVDLE SARRIIRVRI AGEERWAAIE
DAGRLQDALG VPLPVGIPEA FTAVVADPLG DLVARYARTH GPFNAIEPAT RFGIPASSVI
AALERLAAAG RVLSGEFRPG GSGMEWCDAE VLRRVRRRTM AALRKEAEPV QPRALAMLLP
AWQSVGRAAA SPLRGTDGVL RVVEQLAGAV VPASALERLI LPSRIVDYSP TMLDELTSSG
EVVWAGAGSL AGDDGWVTLC PAELAPLLLP EPSEALDPGP VHEAILEALG EDAALFLRGI
VARVSDTFSS GEVLSGLWDL LWAGYITNDT LAPLRGLLGS GKSAHKTRRP TPRGRYARFG
VAAVAADQNA SAAVSPSAAG RWSRLAPRIA DPTRRAHLLG EVLLDRYGVV TRGSVMSEHI
PGGYAGVYSV LSAYEEAGRT RRGYFVEGLG AAQFAAEGAV DRLRSLAAAL ETLQNREHEA
TGAALDDSVH KLMGTPHEYT PRRPKKDPER IGALVLAATD PANAYGAALP WPTRPTPEDP
NATTNTGHKP GRKAGALVVL VDGALTLYVE RGGRTLLSWT EDPAALQPAA DALALTVRDG
WLGKLTVSKT DGEDVLYAGK TSPLAQALAA AGFRTTPSGL RLRS
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