Gene Caci_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1574 
Symbol 
ID8332917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1777521 
End bp1778468 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content73% 
IMG OID644954724 
Productglycosyl transferase family 2 
Protein accessionYP_003112336 
Protein GI256390772 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCCG CCCTGTCCGC CGACCCACCC CCGGCAAACG AGATCGTCTC GGTCCTCGTC 
CCGCTCCTGA ACGACGAACG CCGCGTCCTG CGGTGTGTGC GGGCTCTGCT GAGCCAGACC
CGGGTGTCGA AACTGGACGT GGTCTTCCTG GACGCGGGCT CCACGGACCT CACCCGCCGC
CTGGTCTTGC AAGCCGCGAT GGACGACCCG CGCGTGCGCC TGCTGGTCGG CGCACCTACC
CCACAGGGAT GGTGCGCGCA CGCTCACGCC TGCGAGCAAC TCGCGGTCGC CGCACGCGGC
AAGGCGATGG TGTTCGCCGA CCCGGGCTTG GCGTTGGCGC CAGGCGCGAT CGCCTCTGCG
GTGGCGGCAC TGCGCGGACC GCGCCGGATG GACTTGGTCG TCGCCGAGGC GCGACGACGA
ACTCCCGTCG ACCGCACACC GGCAACCGGA CCGCGGCCGT CCACATCGGC GCGCTTGCTC
GCGGTCGACA GCGAGACCTA CTGGCGAGTC GGCGGCCATT GCAACGCAGC ACACGACGCA
CACGGCGAGA CGGGACTGGT ACGCGCGGTC CGGCGAGCCG GCGGGCAGGT CGCGACGCTC
GACGGACGGC ACGCAATAGA GTTCCTGGAC GGCTCGCTAT GGCCGCGCGA GCGCGCAGGC
ATTGCGGCCG CGACAGGCAG CGGCGGACGG CACCCGCTAT ACGACACGGA GAACTCGATC
CTGCACTCCT TCACGGACAC CGCGCGGCGT TTGCTGGCGG CGTTCACGAC GGCGCCAACG
CAGGTACGGC CCGCCACTTC GCGCCCGGCG GGACAGGTGC GGCGCGCGCC GATGCGGCCG
ACGGCGGCGC CCGCCGGACC GGTGGCGGAC GCGGCGGCGA ACCGGGCAGC GGGGTACGCG
GCGAAGGCGA TGGCCGAGGC GGTCGCGGCG GTGGATGCGG GGCGCTGA
 
Protein sequence
MPSALSADPP PANEIVSVLV PLLNDERRVL RCVRALLSQT RVSKLDVVFL DAGSTDLTRR 
LVLQAAMDDP RVRLLVGAPT PQGWCAHAHA CEQLAVAARG KAMVFADPGL ALAPGAIASA
VAALRGPRRM DLVVAEARRR TPVDRTPATG PRPSTSARLL AVDSETYWRV GGHCNAAHDA
HGETGLVRAV RRAGGQVATL DGRHAIEFLD GSLWPRERAG IAAATGSGGR HPLYDTENSI
LHSFTDTARR LLAAFTTAPT QVRPATSRPA GQVRRAPMRP TAAPAGPVAD AAANRAAGYA
AKAMAEAVAA VDAGR