Gene Caci_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1568 
Symbol 
ID8332911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1771846 
End bp1773009 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID644954718 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003112330 
Protein GI256390766 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.681291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCGTCATCGT CGAGGCGGTG CGCACCCCGA TCGGCAAGCG CAACGGCGAG 
CTGGCCAACC TGCATCCGGC CTACCTGCTC GGCGAGACCT ACCGGGAGCT GCTGAAGCGG
ACCGGCGTGC CGGCCGACGC GGTGGAGCAG ATCGTCGGAG GCTGCGTCAC CCAGGCCGGC
GAGCAGGGGT TCAACGTCGC GCGCACGGCG TGGCTGGCGA TGGGCCTGCC GTACTCGACC
GCCGCGACCA CGATCGACTG CCAGTGCGGC TCCTCGCAGC AGGCGAACAA CATGGTGGCC
TCGATGGTCG GCGGCGGGAC CGTGGACGTC GGCATCGGCT GCGGGGTCGA GGCGATGTCG
CGCGTGCCGC TCGGCGCCAA CGCCAAGTCA GGCTTCGGAC GTCCGCAGCC CGACGAGTGG
AACCTCGACA TGCCGAACCA GTTCGAGGCC GCGGAGCGGA TCGCGCGCAA GCACGGGATC
GCCCGCGAGG ACACCGACGC GCTGGGCGTC CTGTCCCAGG CGCGCGCCAA GCAGGCCTGG
GCCGAGGGCC GCTTCGACCG CGAGGTGTTC GAGGTCCAGG TCCCCACCCG CGAGGAGGAG
CGCGACGAGC ACGGCATGTG GCGCGCGGTC GGCCGCGACC AAGGACTGCG CGACACCACC
CAGGAAGGGC TGGCCGGACT GAAACCGGTT CTCCCCGACG GCATCCACAC CGCAGGCACC
GCCTCCCAGA TCTCCGACGG CGCCGCCGCG GTGCTGTGGG CCTCGCGCGA CACAGCGCGC
GCCCTGGGCC TGCGCCCCCG CGCCCGCATC GTCGCGCAGG TGATGGTCGG CTCGGACCCC
TACTTCCACC TCGACGGCCC GATCCCGGCG ACCACCGCGG TCCTGGCCAA GGCCGGGATG
ACGGTCGGCG ACATCGACCT GTTCGAGATC AACGAAGCCT TCGCCTCGGT GGTGCTGGCC
TGGTCGCGCG CGCACCGGGT CGACATGGCC AAGGTGAACG TCAACGGCGG CGCGCTGGCG
ATCGGGCACC CGGTCGGCGC GACCGGCGCG CGCCTGTTCA CCACGGCGCT GCACGAGTTG
GAGCGCGCGG ACAAGGAATA CGCGCTCCTC ACGATGTGCC AGGGCGGGGC GCTGGGGATC
GCAACGATCA TCCAGCGGAT CTGA
 
Protein sequence
MSEAVIVEAV RTPIGKRNGE LANLHPAYLL GETYRELLKR TGVPADAVEQ IVGGCVTQAG 
EQGFNVARTA WLAMGLPYST AATTIDCQCG SSQQANNMVA SMVGGGTVDV GIGCGVEAMS
RVPLGANAKS GFGRPQPDEW NLDMPNQFEA AERIARKHGI AREDTDALGV LSQARAKQAW
AEGRFDREVF EVQVPTREEE RDEHGMWRAV GRDQGLRDTT QEGLAGLKPV LPDGIHTAGT
ASQISDGAAA VLWASRDTAR ALGLRPRARI VAQVMVGSDP YFHLDGPIPA TTAVLAKAGM
TVGDIDLFEI NEAFASVVLA WSRAHRVDMA KVNVNGGALA IGHPVGATGA RLFTTALHEL
ERADKEYALL TMCQGGALGI ATIIQRI