Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1559 |
Symbol | |
ID | 8332901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1765023 |
End bp | 1765532 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954708 |
Product | hypothetical protein |
Protein accession | YP_003112321 |
Protein GI | 256390757 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.002298 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00736578 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGAACG ACATGAAGGA GGACAGTTCC GTGGGCGCGG TCGCGGACAC AGTTCAGGCC GCCGCCAACC CGCTGGCTGT GCGCCTGGGC TTCCAGGCGG GCGATGTGGT GCAGGAACTC GGCTGGGACG AGGACTGCGA CGAGGAACTG CGTCAGGCCA TCATGGACAC GATCGGCGCG GACCTGGTCG ACGTGGACTT CGAAGACGTG GTCGACGCGG TGGTGCTGTG GCACCGCACG GACGACGGCG ACCTGGTGGA CAACCTGGTC GACGCCCTGA CCTCGCTGGC TGACGGCGGC CCGATCTGGC TGCTCACGCC CAAGACGGGG GACGGCCACG TGGAACCCAG CGAGATCGGC GAGGCGGCGC CGACCGCCGG GCTGTCGGCG ACGTCCAGCA TCAGCGCCGG TCCCGACTGG TCGGGAACCC GGCTGGTGAG CCCGAAGGCC GGCGCGAAGG TGGCGAAGTC CGCGGTTCGA GCCAAGGCCG ACGACAGCGC GGGGAACTAG
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Protein sequence | MQNDMKEDSS VGAVADTVQA AANPLAVRLG FQAGDVVQEL GWDEDCDEEL RQAIMDTIGA DLVDVDFEDV VDAVVLWHRT DDGDLVDNLV DALTSLADGG PIWLLTPKTG DGHVEPSEIG EAAPTAGLSA TSSISAGPDW SGTRLVSPKA GAKVAKSAVR AKADDSAGN
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