Gene Caci_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1559 
Symbol 
ID8332901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1765023 
End bp1765532 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID644954708 
Producthypothetical protein 
Protein accessionYP_003112321 
Protein GI256390757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.002298 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00736578 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGAACG ACATGAAGGA GGACAGTTCC GTGGGCGCGG TCGCGGACAC AGTTCAGGCC 
GCCGCCAACC CGCTGGCTGT GCGCCTGGGC TTCCAGGCGG GCGATGTGGT GCAGGAACTC
GGCTGGGACG AGGACTGCGA CGAGGAACTG CGTCAGGCCA TCATGGACAC GATCGGCGCG
GACCTGGTCG ACGTGGACTT CGAAGACGTG GTCGACGCGG TGGTGCTGTG GCACCGCACG
GACGACGGCG ACCTGGTGGA CAACCTGGTC GACGCCCTGA CCTCGCTGGC TGACGGCGGC
CCGATCTGGC TGCTCACGCC CAAGACGGGG GACGGCCACG TGGAACCCAG CGAGATCGGC
GAGGCGGCGC CGACCGCCGG GCTGTCGGCG ACGTCCAGCA TCAGCGCCGG TCCCGACTGG
TCGGGAACCC GGCTGGTGAG CCCGAAGGCC GGCGCGAAGG TGGCGAAGTC CGCGGTTCGA
GCCAAGGCCG ACGACAGCGC GGGGAACTAG
 
Protein sequence
MQNDMKEDSS VGAVADTVQA AANPLAVRLG FQAGDVVQEL GWDEDCDEEL RQAIMDTIGA 
DLVDVDFEDV VDAVVLWHRT DDGDLVDNLV DALTSLADGG PIWLLTPKTG DGHVEPSEIG
EAAPTAGLSA TSSISAGPDW SGTRLVSPKA GAKVAKSAVR AKADDSAGN