| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1554 |
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| Symbol | |
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| ID | 8332896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1757032 |
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| End bp | 1758540 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954703 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003112316 |
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| Protein GI | 256390752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.028716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCGG TTGCCTCCGC CGAGGCGGGC AGCGTGCGGC TGGGCACGCC GATCGGCCGG
GGCGTCCTGG CGACCACCAT CCTGGGGTCG GCGATGGCCT TCCTCGACGG CACGGTGGTC
AACATCGCGC TGCCGCGCAT CGGCAGCCAG TTCGGGGCGA CGCTGGCCGG GCTGCAGTGG
ACGGTCACCG GCTACACCCT CACCCTGGCC GCCTTCGTCC TGGTCGGCGG CTCGCTCGGG
GACCGCTTCG GCCGCCGCCG GGTGTTCCTG ATCGGCGTGG TCTGGTTCGC GCTGGCCTCG
CTGGCCTGCG GGCTGGCGCC GAGTCTGGGC TTCCTGATCG CCTTCCGCGC GATCCAGGGC
ATCGGCAGCG CGCTGCTGAC GCCCGGTGCG CTGGCGCTGA TCCAGTCGGT GTTCCACCCC
GACGACCGCG CCAAGGCCGT CGGCGCCTGG TCCGGGCTGG CCAGCATCGC CGGCGCGGCC
GGTCCGCTGG TCGGCGGCTA TCTCATCGAG TACGCCTCGT GGCGCTGGAT CTTCCTGGTC
AACCTGCCGC TGGCGGCCGC GGTCGTGGCG ATCGCGCTGC GCTACGTGCC GGAGTCCAAG
GAGCTGGTCG CGGGCCACTT CGACCTGCCC GGCGCCGTCC TCGGCGCGGT GGGTCTGGCC
GGGGTCACCT ACGCGCTGGT CGAGGCCGGC TCCAAGGGGC TGGGGTCGGC GAGCGTGATC
GTGACCGCGG TGCTCGGCGT CGCGGCGCTG GTGGCCTTCG TCCTGGTCGA GCGGCGCTCC
CCGGCGCCGA TGATGCCGCT GTCGCTGTTC AGCTCGCGGG AGTTCAGTGC GGCGAACGCC
CTGACGCTGA CCGCGTACGG GGCGCTCGGC GCGCTGTTCT TCTTCTTCGC GACGTACCTG
CAGGTGGTCG GCGGCTACTC GCCGCTGGAG GCGGGACTGG CCTCGCTGCC GACCACGGTC
GTGTTGATGA CGCTGTCCTC GCGGGTCGGC GGCCTCACCA CCAAGGTCGG CGCACGCCGC
CTGATCACCG CTGGCGGCGC GCTGACGGCG ATCGGCACGC TGATCCTGGC CACGTCCGGC
CACCACCCGG ACTATTTGAC TCACATCCTG CCCGGCCTGC TGGTGTTCTC CCTCGGCATG
GTGATGATCG CGGTCCCGGT GACCGTGACG GTGCTGAACT CCACCACCAC CGACCGCGCC
GGCATCGCCA GCGGCGTGAA CAACGCGGTG GCCCGCGCCG CCGGCGCCCT GGCCGTGGCG
GCGTTCCCGC TGCTGGTGGG ACTGAAGGGC GACGGCTACG CGAACCCGGC GAAGCTCGAG
CCGGCGTTCA CCAAGGCGAT GGTGCTGTCC GCGGCGCTGT TCGCGGTCTC CGGCGCCATC
GCCTGGTTCG GCATCCGCGA CGCGGCGACG CGCACGACGC CGGAGCACGA GGCGCAGGAG
CCGCAGTGCG CGACGTGCCT GCCGATAGGG AGCCCGCCGC TGGAGCCGGC CCAGGATCGG
GCCGGCTGA
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| Protein sequence | MSPVASAEAG SVRLGTPIGR GVLATTILGS AMAFLDGTVV NIALPRIGSQ FGATLAGLQW
TVTGYTLTLA AFVLVGGSLG DRFGRRRVFL IGVVWFALAS LACGLAPSLG FLIAFRAIQG
IGSALLTPGA LALIQSVFHP DDRAKAVGAW SGLASIAGAA GPLVGGYLIE YASWRWIFLV
NLPLAAAVVA IALRYVPESK ELVAGHFDLP GAVLGAVGLA GVTYALVEAG SKGLGSASVI
VTAVLGVAAL VAFVLVERRS PAPMMPLSLF SSREFSAANA LTLTAYGALG ALFFFFATYL
QVVGGYSPLE AGLASLPTTV VLMTLSSRVG GLTTKVGARR LITAGGALTA IGTLILATSG
HHPDYLTHIL PGLLVFSLGM VMIAVPVTVT VLNSTTTDRA GIASGVNNAV ARAAGALAVA
AFPLLVGLKG DGYANPAKLE PAFTKAMVLS AALFAVSGAI AWFGIRDAAT RTTPEHEAQE
PQCATCLPIG SPPLEPAQDR AG
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