Gene Caci_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1552 
Symbol 
ID8332891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1753192 
End bp1753671 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID644954698 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003112314 
Protein GI256390750 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0480291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA GGACGAACGA CCGGGCCGGC GGCTACCATC TGGATCCCCT GTCCAAGGCG 
ATCATCGAAC AGCTCCAACA GGACGGCAGG CGCGCGTACG CGACGATCGG CCGGGCGGTG
GGTCTGAGCG AGGCCGCCGT GCGCCAGCGG GTGCAGAAGC TCATCGACGC CGGCGTCATG
CAGATCGTGG CCGTGACCGA CCCGCTGACC GTGGGCTTCC ACCGCCAGGC GATGATCGGC
ATCCGCGCCG AGGGCGATCT GGAGCCGGTG GCCGACGCGC TGGCCGCCAT GGCCGAGGTG
GACTACGTGG TGATGACCGC CGGGTCCTTC GACCTGCTGG TCGAGGTGGT GTGCGCGGAC
GACGACCACC TCCTGGAGAT CATCAACAAG CGGATCCGAG CGCTCCCGCA GGTCCGGTCG
ACCGAATCTT TCGTCTACCT CAAGCTTCGC AAACAAACGT ACACCTGGGG CGCCCTGTAG
 
Protein sequence
MTDRTNDRAG GYHLDPLSKA IIEQLQQDGR RAYATIGRAV GLSEAAVRQR VQKLIDAGVM 
QIVAVTDPLT VGFHRQAMIG IRAEGDLEPV ADALAAMAEV DYVVMTAGSF DLLVEVVCAD
DDHLLEIINK RIRALPQVRS TESFVYLKLR KQTYTWGAL