Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1549 |
Symbol | |
ID | 8332888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1749543 |
End bp | 1750961 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954695 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003112311 |
Protein GI | 256390747 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0684426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGG TGAGTGCCGT GGACGCGGCG GGCACGATCG ACGGCGACCT TTCGCTGTGG CACGAGCAGG TGGCGGCGGC TGGTCCCGCG CCGAACCGTC CCACGCTGGC GGCTGATATC GAGGCTGATA TCGCGATCGT CGGCGCGGGA TACACCGGTC TGTGGACCGC GTACTACCTC GCCAAGGCCG ATCCGTCGCT GCGGGTCGTG GTGCTGGAGC GCGAGTTCGC GGGGTTCGGC GCCTCGGGGC GTAACGGCGG CTGGTGCTCC TCGCTGTTCC CTTCCTCGTT GGCGAAGGTG GCGAAGGTCG GCGGCGGGAA AGAGCGCGCG GTCGCCTTGC AGCGCGCGCT GAACGAGACC GTCGACGAGG TCGGGCGTGT GGCCGCGGAG GAAAGGATCG ACTGCCATTT CGCCAAGGGC GGCACGGTGG TTCTGGCCCG CACTCCGGTT CAGCTGGAAC GTGCGAAGGC CTCGGTCGCC GATGAGCGGT CGTACGGTTT CGGCGAGGAG GATGTCAGGC TGCTGAGTGC GGCTGAAGCC TCAGCGATGG TCGGCGCGAC GAACGTGCTC GGCGGCACGT TCACCCCGCA CTGCGCGGCG ATCCAGCCGG CGATGCTCGC GCGCGGTCTG GCCGAGGCCG TCGACCGGCT CGGCGTCACG ATCCACGAGC ACACAGCGGT CGCGGCGATC CATGACGGCG TGGTGCAGAC CGTGGGCGGA GCGCGCGTCC GAGCCGGAAA GGTAGTGCGC GCGACCGAGG GTTACACGCC GTCGATCGCC GGCTTCCAGC GCGATCTGGC GCCGGTCTAC TCGCTGATGG TCGCCACCGA ACCGCTGCCG GACGCGGTCT GGGAGCAGAT CGGGCTGGCC GGGCGGCAGA CCTTCTCCGA CTTCCGCCAC CTGATCGTCT ACGGTCAGCG CACCGCCGAC AGCCGGCTGG CGTTCGGCGG CCGCGGCGCG CCGTACCACT TCGGCTCGCG GATCGAGGCC GGCTACGACC GGGACGACCG CGTGCACGCC GAGATCCGCC GCACGCTGCG CGAGCTGTTC CCGGTGTTGA AGGACACTGC GTTCACGCAC CGCTGGGGCG GGGCGCTGGG CGTCCCGCGC GACTGGTTCG CCTCGGTCGG CTACGACGCG AGGCGGCGGC TGGGATGGGC CGGCGGCTAC GTCGGCGACG GCGTGGGCGC GACGAACCTG GCCGGACGCA CGCTCGCGGA CCTGCTGACC GGCCGCGACT CCGCCCTGAC CCGGCTGCCG TGGGTCAACC ACCACTCGCC GCGCTGGGAG CCGGAGCCGC TGCGCTGGCT CGGCGCGAAC ATCGGCCTGC GGACGATGAG CGCGGCCGAC GCCGAGGAGG AGCGGACCGG GAAATCCTCG GTGCGCGCAA AGGTTTTCGG GCGCTTCCTC GGGCACTGA
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Protein sequence | MAAVSAVDAA GTIDGDLSLW HEQVAAAGPA PNRPTLAADI EADIAIVGAG YTGLWTAYYL AKADPSLRVV VLEREFAGFG ASGRNGGWCS SLFPSSLAKV AKVGGGKERA VALQRALNET VDEVGRVAAE ERIDCHFAKG GTVVLARTPV QLERAKASVA DERSYGFGEE DVRLLSAAEA SAMVGATNVL GGTFTPHCAA IQPAMLARGL AEAVDRLGVT IHEHTAVAAI HDGVVQTVGG ARVRAGKVVR ATEGYTPSIA GFQRDLAPVY SLMVATEPLP DAVWEQIGLA GRQTFSDFRH LIVYGQRTAD SRLAFGGRGA PYHFGSRIEA GYDRDDRVHA EIRRTLRELF PVLKDTAFTH RWGGALGVPR DWFASVGYDA RRRLGWAGGY VGDGVGATNL AGRTLADLLT GRDSALTRLP WVNHHSPRWE PEPLRWLGAN IGLRTMSAAD AEEERTGKSS VRAKVFGRFL GH
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