Gene Caci_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1547 
Symbol 
ID8332886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp1747975 
End bp1748559 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content73% 
IMG OID644954693 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003112309 
Protein GI256390745 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0308789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCTGG CTGAGCGGAA ACGCCAGCTG GTCCGCGACG AGCTCGCCGA GGCCGCGCTG 
CGGCTGCTGG CCCGGCAGGG CTTCGAGGAG ACGACCGTCG ACGACCTCGC CGCCGCCGCG 
GGCGTCAGCC GCCGCACGTT CTTCCGGTAC TTCGCCTCCA AGGAGGACGT GGTCATCTCC 
TCGGTCGTCG TGGTGACCGA GGGGATCGTC GCCGAGGTCG CCGCCCGCCC CGCCGACGAA 
CCCCCCGCCG TGGCGATCCG CGAGGCGGTC AAGACCGTCA CCCTCGAGGA CTTCGCCGAG 
AACCGCGAGA AGTCGGTGGC CCTGATCCGC CACACCCAGA ACATCCCCGC CCTGCGCGCC 
CGCTTCGCCG AGCGCCAGGA CCTCCTGCGC GACGACCTCG CCGCGGTCCT TGCCCGCCGC 
GCCGGCCGCG ACACCATCGC CCCGCGCGAC CAGTTCGCCG CCGGGCTGGG TCTGCTCGCG 
TTCGTCGGCG CGCTGCAGTA CTGGGCCGCC TCCGACGGCC GCGCCGATCC CGCCGCCGTA 
CTCGACTCAG CGTTCGAAGA AGCTGGTCAA GCCTTCACGG TTTGA
 
Protein sequence
MSLAERKRQL VRDELAEAAL RLLARQGFEE TTVDDLAAAA GVSRRTFFRY FASKEDVVIS 
SVVVVTEGIV AEVAARPADE PPAVAIREAV KTVTLEDFAE NREKSVALIR HTQNIPALRA 
RFAERQDLLR DDLAAVLARR AGRDTIAPRD QFAAGLGLLA FVGALQYWAA SDGRADPAAV 
LDSAFEEAGQ AFTV