Gene Caci_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1535 
Symbol 
ID8332874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1739733 
End bp1740284 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID644954681 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003112297 
Protein GI256390733 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.918183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0405313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAGT TCGCGATCCT CGGCTTCCTC TTCGAAGCCC GACTGCACGG CTACGAGCTG 
CGCAAGCGGC TGGCCGCGCT GACCGGCCAC ATCCGCCCGA TCGCGGACGG CACCCTCTAT
CCGGCGATCA AGCGCCTCGT GGAGGGCTGC TTGGTGATCA AGAACCTGGA GGCGGGGTCG
ATCGCCGCGC CCCGGCACAT GCTGGAGCTG ACCCCGGCCG GCCGCGACAA ACTGCTGCGG
ATGCTGCGCG AGCCCCCCGA GGTCTTCGTC ACTGATGAGA ACCACTGGTT CTGCCTGCTG
GCGTTCCTGC GCCACCTCGA CGACCCGGCG GCGCAGGCCG CGGTCCTGCG GCGCCGCCTG
GAGTTCCTGA GTGTCCCGGC GAGCTTCTTC TATGAGGACG ATCACGCGCT GAGCGCTGAG
GAGGTCGGCG ACCCGTTCCG GCGCGGTGTG CTGGAGATCG CGCGTGTGAC CAGTCGCACT
GAGCTGAAGT GGCTGGACGC GACCATCGAG GAGCTCGATG AACTGAGCGG TCACTCGGGC
GTGGGAAACT AG
 
Protein sequence
MLEFAILGFL FEARLHGYEL RKRLAALTGH IRPIADGTLY PAIKRLVEGC LVIKNLEAGS 
IAAPRHMLEL TPAGRDKLLR MLREPPEVFV TDENHWFCLL AFLRHLDDPA AQAAVLRRRL
EFLSVPASFF YEDDHALSAE EVGDPFRRGV LEIARVTSRT ELKWLDATIE ELDELSGHSG
VGN