Gene Caci_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1533 
Symbol 
ID8332872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1737629 
End bp1738735 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content73% 
IMG OID644954679 
ProductPhosphatidate cytidylyltransferase 
Protein accessionYP_003112295 
Protein GI256390731 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0529885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA CGCAGACCAG GCGCGGTGAG GCGCGGGCCC CCGGCGACGG GCCGGGCGGC 
GGCGGTGCCG GGCGTTCTGG CGCGGGCTCG CGCGGCGCCG GCGGTCCGGG TGGCTCCGGC
GGTCAAGGTG CTCAAGGCGG CCAGGGTGGT TATGGCGGCC AAGGCGGTTA TGGCGGTCCC
GGCGGTCCCG GCGACGGCCC GGGCGGAGCC AACGGCGGCG GACCCGGAAG CTCCGGACCG
GGCGCATACG GCACCGGCGG CACCCCCGGC CCGGCCGGCA ACGCCCCCGG CAAGCCCTCC
GGCCGCGCCG GACGCAACCT GCCGGCCGCC ATCGGCGTCG GCGTCGCTCT GGGCGCGGTC
CTGCTCGGCA CGCTGTTCCT GCGCGGCGCG TTCGCGGTCG TCGTCGCGAT CGCCGTGGTG
ATAGGCGTCC GCGAGCTCGC CCAGGCGATG TCCACCCGGG ACGTGCAGGT CCCGTGGCCG
CCGATCGCCG CCGGCGGGCT CGGCATGATC GCCGGGTCCT GGTTCGGCGG CCCGACCGCG
ATGGTCGCGG TGCTGGCGAT GACCGCGCTG GCGGTGCTGG TCTGGCGGAT GGCCGAGGGC
GCGGACGGCT TCCTGCGCGA CGCCACAGCC GGTCTGTTCA CCCTGGTCTA CGTCCCGATG
CTGGCCTCGT TCGCGGTGCT GATGCTGGCC CAGGACAACG GCTACAAGCG CGTGATCCTG
TTCCTGACGC TGCCCATCGC CAACGACACC GGCGGCTACG CGACCGGCGT CTTCTTCGGC
AAGCACAAGC TGGCGCCCAA GATCTCCCCC GGAAAGACCT GGGAGGGCCT GATCGGCTCG
CTGATCGTGA CCGCCGCGGT CGCCTCGATC GGCATCACGC AGATGCTGGA CGGCAAGGTC
TGGCAGGGCG TGCTGCTCGG CGTCGCCGCG GTCGCCTCGG CCACCCTCGG CGACCTGATC
GAGTCGGTCA TCAAGCGGGA CCTCGGCATC AAGGACATGG GAAACCTGCT CCCCGGCCAC
GGCGGCATCA TGGACCGGCT GGACTCGATG CTGGCGACCG CGCCGGTGGC GTGGCTGCTG
CTGGGATTGT TCCTCGGCTG GAAGTAG
 
Protein sequence
MASTQTRRGE ARAPGDGPGG GGAGRSGAGS RGAGGPGGSG GQGAQGGQGG YGGQGGYGGP 
GGPGDGPGGA NGGGPGSSGP GAYGTGGTPG PAGNAPGKPS GRAGRNLPAA IGVGVALGAV
LLGTLFLRGA FAVVVAIAVV IGVRELAQAM STRDVQVPWP PIAAGGLGMI AGSWFGGPTA
MVAVLAMTAL AVLVWRMAEG ADGFLRDATA GLFTLVYVPM LASFAVLMLA QDNGYKRVIL
FLTLPIANDT GGYATGVFFG KHKLAPKISP GKTWEGLIGS LIVTAAVASI GITQMLDGKV
WQGVLLGVAA VASATLGDLI ESVIKRDLGI KDMGNLLPGH GGIMDRLDSM LATAPVAWLL
LGLFLGWK