Gene Caci_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1528 
Symbol 
ID8332867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1733336 
End bp1733755 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID644954674 
ProductPeptidase M23 
Protein accessionYP_003112290 
Protein GI256390726 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0244521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTCC ACGGCTTCCA GCCTCCCGCG AAGCGGTGGC AGACCGGGCA TCGCGGTGTC 
GACCTCCTCG GTGGTCCGGG GCAGGAGGTT CTGGCTGCCG GTGAGGGCAC CGTCAGCTAC
GCCGGGATAC TGTTCGGCCG TCCCGTCGTC GCCATCGACC ACACCGCGCC GGGTCGGGAC
ACGCTGCGTA CCACCTACGA ACCTGTCGAT CCCGCCGTCA AGGTTGGCGA CAAAGTTCGG
ACCGGTCAGC TCATCGGCCA TCTCGTCGAC TCGCCCTCTA ACCACTGCGC GCCGCTGACC
TGTCTGCACT GGGGTCTCGT GCGTGGCTTC GGGCATGCTG AGCGCTACCT TGACCCGACT
GCGTTGCTGA ACCGGGGACC TGTGCGGTTG TTGCCGGTGT GGGGAGTGCG GTGGGGGTGA
 
Protein sequence
MIVHGFQPPA KRWQTGHRGV DLLGGPGQEV LAAGEGTVSY AGILFGRPVV AIDHTAPGRD 
TLRTTYEPVD PAVKVGDKVR TGQLIGHLVD SPSNHCAPLT CLHWGLVRGF GHAERYLDPT
ALLNRGPVRL LPVWGVRWG