Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1512 |
Symbol | |
ID | 8332851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1718465 |
End bp | 1718935 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954658 |
Product | ribosomal protein S16 |
Protein accession | YP_003112274 |
Protein GI | 256390710 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.819052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.241519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCAGTCA AGATCAAGCT CAAGCGCATG GGCAAGATCC GGAACCCGCA GTACCGGATC ATCGTGGCCG ACGCCCGTAC CAAGCGCGAC GGCCGGGCGA TCGAGGAGAT CGGGAAGTAC CACCCGAAGG AGGACCCCTC CTACATCGAG GTCACCTCCG AGCGCGCGCA GTACTGGCTG GGCGTCGGCG CGCAGCCGAC CGAGGCCGTC GAGGCGATCC TGAAGATCAC CGGCGACTGG CAGAAGTTCA AGGGCCTGGA CGCCCCGGCG CCGATGAAGG TCGCCGCGCC GAAGGCGGAC CGCAAGGCCG TCTTCGAGGC CGCCGCCAAG GAGGCCGCCG ACGAGCCCAA GACCGGCGCC ACCACGCCGA AGAAGAAGGC CGAGAAGAAG GCCGACGAGA CCCCGGCGAC CGAGGCTCCG GTGGAGACCC CGGCCCCGGC CGTCGAGGCT GAGATCGCTT CCGAGGGCTG A
|
Protein sequence | MAVKIKLKRM GKIRNPQYRI IVADARTKRD GRAIEEIGKY HPKEDPSYIE VTSERAQYWL GVGAQPTEAV EAILKITGDW QKFKGLDAPA PMKVAAPKAD RKAVFEAAAK EAADEPKTGA TTPKKKAEKK ADETPATEAP VETPAPAVEA EIASEG
|
| |