Gene Caci_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1506 
SymbolguaA 
ID8332845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1710573 
End bp1712144 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content71% 
IMG OID644954652 
ProductGMP synthase 
Protein accessionYP_003112268 
Protein GI256390704 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGC CTGCCGACAC CGTTCTTGTC ATCGACTTCG GGGCCCAGTA CGCGCAGCTC 
ATCGCGCGCC GGGTCCGTGA AGCCCACGTC TACAGCGAGA TCGTGCCGCA CACCGCGACG
GTCGCCGAGA TCCTCGCCAA GAAGCCCAAG GCGGTGATCC TGTCCGGCGG GCCGTCCTCG
GTCTACGCCG ACGGGGCGCC GAACGTCGGC GCGGAGCTGT TCCGCGCCGG GGTGCCGACC
CTCGGCATCT GTTACGGCTT CCAGGCGATG GCGCGCGCCC TCGGCGGCGT GGTCGAGCAG
ACCGGCGGCC GGGAGTACGG CCGCACCTCG CTGGAGGTCA CCGACACCGA GTCCACGCTG
TTCCAGGGCT CGCACTCCGA GCAGCCGGTG TGGATGTCGC ACGGCGACGC GGTCGTGGCC
GCCCCCGAGG GCTTCCGGGT CACCGGGACC ACAGCCAAGA CCCCGGTCGC GGCGTTCGAG
GACGACGAGA AGCGGCTCTA CGGCGTCCAG CACCACCCCG AGGTCCTGCA CTCGCAGTTC
GGGCAGCTGC TGCTGGAGAA CTTCCTCTAC AAGGGCGCCG GCATCGCGCC GGACTGGACC
ACCGGCAACA TCGTCGAGGA GCAGGTCGCC TCGATCCGCG AGCAGGTCGG CACCAAGCGC
GCCATCTGCG GGCTGTCCGG CGGCGTGGAC TCCGCGGTCG CCGCGGCCAT CGTGCAGAAG
GCGGTCGGCG AGCAGCTCAC CTGCGTGTTC GTCGACCACG GCCTGCTGCG CAAGGGGGAG
GCCGAGCAAG TCGAGAAGGA CTTCGTCGCG GCGACCGGCG TGCAGTTGAA GGTCGTCGAC
GCCGAGCAGC GCTTCCTGTC GGCGCTGGCC GGGGTGTCCG ACCCCGAGGA GAAGCGCAAG
ATCATCGGCC GCGAGTTCAT CCGGGTCTTC GAGCAGGCCG AGCGGGAGAT CGTCGAACAG
TCGGCGGACG CCGGCGAGCC GGTGCGCTTC CTGGTGCAGG GCACGCTCTA CCCCGACGTC
GTGGAGTCCG GCGGCGGCAC CGGCGCGGCG AACATCAAGA GCCACCACAA CGTCGGCGGG
CTGCCGGACG ACTTGCAGTT CGAGCTGATC GAGCCGCTGC GCAAGCTGTT CAAGGACGAG
GTCCGGCAGG TCGGCCGCGA GCTCGGGCTG CCCGAGGCGA TCGTCGGCCG CCAGCCGTTC
CCGGGCCCGG GGCTGGGCAT CCGGATCGTC GGCGAGGTCA CCAAGGCGCG GCTGGACCTG
CTGCGCGAGG CCGACGCCAT CGCCCGCGAG GAGCTGACCG CGGCCGGGCT GGACACCGAG
ATCTGGCAGT GCCCGGTGGT GCTGCTGGCC GACGTGCGCT CGGTCGGCGT GCAGGGCGAC
GGCCGGACCT ACGGCCACCC GATCGTGCTG CGTCCGGTCT CCAGCGAGGA CGCCATGACC
GCCGACTGGT CGCGCCTGCC GTACGAGGTG CTGGCGCGGA TCTCCACGCG GATCACCAAC
GAGGTCGCCG AGGTCAACCG GGTGGTGCTG GACGTCACCA GCAAGCCGCC GGGGACGATC
GAGTGGGAGT AG
 
Protein sequence
MEQPADTVLV IDFGAQYAQL IARRVREAHV YSEIVPHTAT VAEILAKKPK AVILSGGPSS 
VYADGAPNVG AELFRAGVPT LGICYGFQAM ARALGGVVEQ TGGREYGRTS LEVTDTESTL
FQGSHSEQPV WMSHGDAVVA APEGFRVTGT TAKTPVAAFE DDEKRLYGVQ HHPEVLHSQF
GQLLLENFLY KGAGIAPDWT TGNIVEEQVA SIREQVGTKR AICGLSGGVD SAVAAAIVQK
AVGEQLTCVF VDHGLLRKGE AEQVEKDFVA ATGVQLKVVD AEQRFLSALA GVSDPEEKRK
IIGREFIRVF EQAEREIVEQ SADAGEPVRF LVQGTLYPDV VESGGGTGAA NIKSHHNVGG
LPDDLQFELI EPLRKLFKDE VRQVGRELGL PEAIVGRQPF PGPGLGIRIV GEVTKARLDL
LREADAIARE ELTAAGLDTE IWQCPVVLLA DVRSVGVQGD GRTYGHPIVL RPVSSEDAMT
ADWSRLPYEV LARISTRITN EVAEVNRVVL DVTSKPPGTI EWE