Gene Caci_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1505 
Symbol 
ID8332844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1709078 
End bp1710463 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content75% 
IMG OID644954651 
ProductAmidase 
Protein accessionYP_003112267 
Protein GI256390703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCC CGACCGGAAG CGGTGTGGAA CCGCGGACGG CCGCCGAGAT CGCGGCGGCC 
GTCCGTCAGG GAAAGAGCAG TGTGCGCGGT GCCGTCCAGG AGGCTCTGGA CCGCATAGCC
GCCGCGGACC CCCGGATCGG GGCGTTCCGC AAAGTCCGGC ACGACGCGGC GCTGGCCGAG
GCCGACGACC TGGCCCGCCG CCCCGACCTC GCCGAGCTCC CGCTGGCCGG AGTACCGGTC
GCGGTGAAGG ACAACGTCCC GGTCGCCGAC GAGCAGTGCC GCCACGGCAC GGCCGCGACC
GCCGACCGTC CGCCCGAGCC CGAGGACCAC CCGGTGGTGG CGCGGCTCCG CGCCGCCGGC
GCGATCGTGG TCGGCCTCAC CCACACCCCG GAACTGTCGC TGGTCGCGAT GACCGACAGC
GCTCTGGGCA TGGCGCGCAA TCCCTGGGAC CTGACCCGGA CGCCGGGCGG CTCCTCCGGC
GGCGCGGCAG CGGCGGTGGC CGCCGGGCTC GTGCCGATCG CGCACGGCAA CGACGGTCTG
GGCTCGATCC GCGGACCGGC GGCGTGCTGC GGGTTGTTCG GCATCAAGCC CGGCTTCGGG
GTGGTGCCCT CCGGGCTCGG CCGGAACTCC TGGTGGGGGT TGTCCGAGAA CGGCCCGCTG
GCCACCACGG TCGAGGACGC GGCGTTGATG CTGTCGGTGA TGGCCGACGA TCCCACGCTC
GCCGCCGCGC CGGATGTGCG GCCGTCCGGG CTGCGGATCG CGGTGTCGAC GGCGCCGACG
TCGAAGGGCT ACCGCATCGA CCGCGAGTAC AAGGCAGCCG TCGAGAGCGT GGCTGCCCAG
CTCGAAGAGG CCGGGCACAC CATCGTCGAG GCGCGCGGCT ATCCGCAGTA CCTCGGCTTC
GGCGCGGTGC AGACCTGGTA CGCGGCCGCC GCCATGGACG CCGAGGAGTA CGACCGGCGG
GCCCTGGGCC GTACGACGCG CCGGATGGCG GCGGCGGGCC GCACGCTGGC GAAGGTCGGG
ATGACCGGCG CCGGGACCCG CCGGAAGTGG CGGGACACCG GCGCCGAGAG GTTCCTCGGC
GACGCCGACG TCGTGCTGAC CCCGACGCTG CTCAGGCCGC CGCCGGAGGC GCTGCGATGG
GGACGGCGCG GGTTGCTGCG CACCTTCGCG GCGAATACCT CCTACGCCGG GATGTGCCCG
CCGTGGAACC TGGCCGGATG GCCGGCGATG AACGTGCCGA CCGGGACGCA CAGCAGCGGG
ACGCCGATCG GCGTGCAGTT CGCCGCGCGG TCCGGGCAGG AGGCGCTGCT GCTGGGGCTC
GCGGCGCATC TGGAGGCGGT GCGGCCGTGG CCGCGGACGG CGCCGGTGGG GGTCGTGGGC
GGCTGA
 
Protein sequence
MAGPTGSGVE PRTAAEIAAA VRQGKSSVRG AVQEALDRIA AADPRIGAFR KVRHDAALAE 
ADDLARRPDL AELPLAGVPV AVKDNVPVAD EQCRHGTAAT ADRPPEPEDH PVVARLRAAG
AIVVGLTHTP ELSLVAMTDS ALGMARNPWD LTRTPGGSSG GAAAAVAAGL VPIAHGNDGL
GSIRGPAACC GLFGIKPGFG VVPSGLGRNS WWGLSENGPL ATTVEDAALM LSVMADDPTL
AAAPDVRPSG LRIAVSTAPT SKGYRIDREY KAAVESVAAQ LEEAGHTIVE ARGYPQYLGF
GAVQTWYAAA AMDAEEYDRR ALGRTTRRMA AAGRTLAKVG MTGAGTRRKW RDTGAERFLG
DADVVLTPTL LRPPPEALRW GRRGLLRTFA ANTSYAGMCP PWNLAGWPAM NVPTGTHSSG
TPIGVQFAAR SGQEALLLGL AAHLEAVRPW PRTAPVGVVG G