Gene Caci_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1488 
Symbol 
ID8332827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1692383 
End bp1692952 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID644954636 
Productisochorismatase hydrolase 
Protein accessionYP_003112252 
Protein GI256390688 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CACTGATCGT CGTCGACGTC CAGAACGACT TCTGCGAAGG CGGCTCCCTG 
CCGGTCTCCG GCGGCTCGGC CGTCGCCGCC GGCGTGAGCG CCCTGTTGGC CGCCCCGGAC
CGGGGCGGCT TCGAACTCGT GGTGGCGACC CGCGACTGGC ATACCGACCC CGGCTCGCAC
TTCGCCGCCG AACCGGACTA CGCGACGAGC TGGCCGGTGC ACTGCGTGGC CGGCAGCAAG
GGCGCGGAAT TCCACCCGGA GTTCGACCGC ACCCATGTGG ACGAAGTCTT CTCCAAGGGC
GCGTTCCAAG CCGCCTACAG CGGATTCGAA GCCGTCGACG GCGCCGACAC CCCGCTGGGC
GACTGGCTGC GCGCCCGCGG CGTGGACCAG GTCGACGTGG TCGGCATCGC CACCGACTAC
TGCGTGCGCG CCACAGCACT GGACGCGGTG AAGCTGGGCC TGGCCACCCG GCTGCGCTCA
GATCTGGTGG CCGGGGTCGC CGAGGCCTCG ACCGCCACGG CGCTGGAGGA GATGCGCGCG
GCGGGCGTCG AGATCGTGCC GGCTGTCTGA
 
Protein sequence
MTRALIVVDV QNDFCEGGSL PVSGGSAVAA GVSALLAAPD RGGFELVVAT RDWHTDPGSH 
FAAEPDYATS WPVHCVAGSK GAEFHPEFDR THVDEVFSKG AFQAAYSGFE AVDGADTPLG
DWLRARGVDQ VDVVGIATDY CVRATALDAV KLGLATRLRS DLVAGVAEAS TATALEEMRA
AGVEIVPAV