| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1486 |
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| Symbol | |
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| ID | 8332825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1689853 |
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| End bp | 1690992 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954634 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_003112250 |
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| Protein GI | 256390686 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.8916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAA CCGCTACTGC CAGCGCCGCC TCCGCCACCG CCACCAAGGA CCCGTTCCCG
GTCAAGGGGA TGGACGCCGT CGTGTTCGCC GTCGGCAACG CCAAGCAGGC TGCCCACTAC
TACTCCACCG CCTTCGGCAT GAGGGTGGTC GCCTACTCCG GTCCCGAGAC CGGTCGCGCC
GACCGCGTGG CGTATGTGCT GGAGTCCGGC AGCGCGCGCT TCGTGTTCAA GGGCTCGGTC
CGTCCGGGCA CCGAGATCGC GCTGCACGTC GCCGAGCACG GCGACGGCGT GACCGATCTG
GCGATCGCCG TCCCGGACGT CTACGCGGCC TATGAGTACG CCGTCGGGCA CGGCGCCACC
GGCCTGGAGA AGCCGCACGA GGTCGAGGAC GAGAACGGCG TCCTGGTCCG GGCCGCGATC
GCCACCTACG GCGACACCCG CCACTCGCTG GTCGACCGCT CCCGCTACAC CGGCGCCTAC
GCTCCCGGCT ACGTCGAGCG CGCGCCGCTC GTCGAGCCGA ACGCCCGCAT CTTCCAGGCG
ATCGACCACT GCGTCGGCAA CGTCGAGCTG GGCAAGATGG ACGAGTGGGT GGACTTCTAC
CGCCACGTCA TGGGCTTCAC GAACATGGCC GAGTTCATCG GCGACGACAT CGCCACCGAC
TACTCCGCGC TGATGTCCAA GGTCGTCGCC GACGGCACCC GCAAGGTCAA GTTCCCGCTG
AACGAGCCGG CGATCGCGAA GAAGAAGTCG CAGATCGACG AGTACCTGGA GTTCTACGGC
GGTCCGGGCG TCCAGCACAT CGCGCTGAAC ACCGGCGACA TCCTGGCCAC CGTGGACGCG
ATGCGCGCCG CCGGCGTGGA GTTCCTGGAG ACCCCGGACT CCTACTACGA GGACGAGGAG
CTGCGGGCCC GCATCGGTAC TGTCCGCGTC CCGGTCGAGG AGCTGCAGAA GCGCAAGATC
CTCGTGGACC GCGACGAAGA GGGCTATCTG CTCCAGATCT TCACCAAGCC GGTGCAGGAC
CGCCCGACGG TGTTCTTCGA GCTCATCGAG CGGCACGGCA GCCAGGGCTT CGGCAAGGGC
AACTTCAAGG CCCTGTTCGA GGCGATCGAG CGCGAGCAGG AGCGCCGCGG CAACCTGTGA
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| Protein sequence | MTETATASAA SATATKDPFP VKGMDAVVFA VGNAKQAAHY YSTAFGMRVV AYSGPETGRA
DRVAYVLESG SARFVFKGSV RPGTEIALHV AEHGDGVTDL AIAVPDVYAA YEYAVGHGAT
GLEKPHEVED ENGVLVRAAI ATYGDTRHSL VDRSRYTGAY APGYVERAPL VEPNARIFQA
IDHCVGNVEL GKMDEWVDFY RHVMGFTNMA EFIGDDIATD YSALMSKVVA DGTRKVKFPL
NEPAIAKKKS QIDEYLEFYG GPGVQHIALN TGDILATVDA MRAAGVEFLE TPDSYYEDEE
LRARIGTVRV PVEELQKRKI LVDRDEEGYL LQIFTKPVQD RPTVFFELIE RHGSQGFGKG
NFKALFEAIE REQERRGNL
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