Gene Caci_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1481 
Symbol 
ID8332820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp1685749 
End bp1686435 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID644954629 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003112245 
Protein GI256390681 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA CCGATCCCGC CCCGGAGCCG GAGACCAGCC AGACTCTGGA CCGGGGGATC 
CGCGTGCTCA CGGCGCTGGC CGACGCCACG TCCGGACTGA CGGTCGCCCA GCTGGCCGAA 
CGCGTCGGCG CGCCGCGGAC CGCCGGATAC CGGCTGGTCG CCACGCTGGA GGCGCACGGG 
TTGGCACGGC GGGACGCCGA CGGCCGTGTG CACCTCGGGG TGGGAGTGCT GCGGCTTGCC 
GCGCGCGTGC ATCCGCTGCT GCGCGAGGCG GCGACGCCTC CGCTGCGCAA GCTGGCGGAG 
GTCGTGGGCG CGACGGCGCA CCTGACGGTC GCCGAGGGAC CGGACGCGCT GGCGATCGCG 
GTGGTCGAGC CGACGTGGAC GGACTATCAC ATGGCCTACC GCGTGGGATC ACGGCACCGG 
CTGGCGCAGG GCGCGGCGGG GAAGGCGATC CTGTTGGGGC GCGCGGGGGT CGGGCGGCCG 
GCTTCGGTGT CGAAGGATCC TGCGACGCTC TACACGGCGA GCGAGGGCGA GTTGCAGGCC 
GGGGCGCACG GGATCGCCGC GCCGATCCGG GACGTGCCGG GGTTGGAGGC GAGCGTCGGG 
GTGGTTTCCT TCGCGCCGCT GGACGCGGCG AAGGTGGCGC CGCGGGTGAT TCAGGCGGCT 
GCTGAGATCT CTGCTGCTTT GAAGTAG
 
Protein sequence
MTRTDPAPEP ETSQTLDRGI RVLTALADAT SGLTVAQLAE RVGAPRTAGY RLVATLEAHG 
LARRDADGRV HLGVGVLRLA ARVHPLLREA ATPPLRKLAE VVGATAHLTV AEGPDALAIA 
VVEPTWTDYH MAYRVGSRHR LAQGAAGKAI LLGRAGVGRP ASVSKDPATL YTASEGELQA 
GAHGIAAPIR DVPGLEASVG VVSFAPLDAA KVAPRVIQAA AEISAALK