| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1478 |
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| Symbol | |
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| ID | 8332817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1683165 |
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| End bp | 1684373 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954626 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003112242 |
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| Protein GI | 256390678 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGA TCAGCGATCC GAGCCGAGCC GAGAGCAGCG CAGAGGCCGG AGAAGCCACC
GAGGTGATCT CGCGCGGAGT CCGCGGCCGC ATGGCGGTCT GGGGCGCGGC GCACGCGGTC
GACGACATGT ATCAGGGCCT TGTCCCGGCC AGCGTCCCCT ACTTCGTTCT GGAGCGGCAC
TACAGCTACC TGGCGGCCTC CGGACTCACG TTGGCTGCGA CGCTGGGCAG CGCGCTTCCG
CAGCCGCTTG TCGGGCTCGC CGTGGACCGC TGGCGGCTGC CTCGCTTGGC TGCGGTGGGC
GTCGCGGTCG CCGGGACCGG GCTCGGGCTG TCGGGGCTGG CGGGTCCGTA CGCACTGGTC
TGGCTCTGCA TTCTGATATC AGGGTTCGGA GTCGCGATGT TCCACCCCGC GGCCGGCCGC
TCGGCGCGCG AGGCCGCCGG GGACAGCGCC GCCGCGATGA GCGTCTTCGC CGCCGGCGGG
AGCGTCGGCT TCTTTCTGGC ACCGGTCCTC GCGACTCCGG CTTTGAACGC GTGGGGCGTC
GGCGCGACGG CGCTGTTCAT CCCGCCGGCA TGGCTCATCG CCTTGGTACT GCTCAAAAAG
CGCGCCGGCA CCAGGCCATC TCACGCGGCG GCGAGTGGCG GCCAGGACCG TTGGGGACCG
TTCGCGGCGC TGACCGGCAT CGAGGTGGTC CGCTCGGCAG CCTTCTTCGG CATCAACACC
TTCATCGAGC TGTACTGGAT CAAGCACCTG CACGCCTCCC GCACCATGGC CGGCGCCGCC
CTCGCCTGCT TCCTCATCGG CGGCGTCGCC GGCACCCTCC TTGGCGGCCG CATCGCCGAC
CGCGTCGGCA TGGTCCGCAC CGTCCAACTC GGCGGCGCCC TCACCATCCC CATGCTGCTG
GCCCTCCGCT TCAGCCCGGG CGCCGTCGCA CCGCTGGCCT TCGCAGTCCT CACCGGACTA
GCCCTGAACA TCCCGTTCGC TGTCCTGGTG AAACTCGGCC AGGACTACCT CCCCGGCCGC
CCCGGCACAG CCGCAGGCGT CACGCTCGGG CTGGGCGTCA GCGCGGGAGG GCTGATGGCA
CCCGTCTTCG GCCTGATCGC CGAACACCGC GGCCCGCAGG GAGTGCTGAC GGCGCTGTGC
GCGGTACCGA TCGCGGGGAT AGTGCTGGGG TTTCTGCTGC GGGAGCCTCA GAAGACTGAT
GGATCGTGA
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| Protein sequence | MSLISDPSRA ESSAEAGEAT EVISRGVRGR MAVWGAAHAV DDMYQGLVPA SVPYFVLERH
YSYLAASGLT LAATLGSALP QPLVGLAVDR WRLPRLAAVG VAVAGTGLGL SGLAGPYALV
WLCILISGFG VAMFHPAAGR SAREAAGDSA AAMSVFAAGG SVGFFLAPVL ATPALNAWGV
GATALFIPPA WLIALVLLKK RAGTRPSHAA ASGGQDRWGP FAALTGIEVV RSAAFFGINT
FIELYWIKHL HASRTMAGAA LACFLIGGVA GTLLGGRIAD RVGMVRTVQL GGALTIPMLL
ALRFSPGAVA PLAFAVLTGL ALNIPFAVLV KLGQDYLPGR PGTAAGVTLG LGVSAGGLMA
PVFGLIAEHR GPQGVLTALC AVPIAGIVLG FLLREPQKTD GS
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