Gene Caci_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1476 
Symbol 
ID8332815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1678919 
End bp1681198 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content74% 
IMG OID644954624 
Productaldehyde oxidase and xanthine dehydrogenase a/b hammerhead 
Protein accessionYP_003112240 
Protein GI256390676 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CGAAGTTCCC GGCCGACCTG CGCGCCGAGG GCATGCTCTG GATGGGCGTC 
ACCCGCTCCC CGCACGCCAG CGCGGCGATC CGCGGCCTGG ACATGCGGGC CGCGCGCGCC
ATCCCCGGCG TGCACGCCGT CCTGTCCGCC GCCGACCTGC CCGGCTACAA CTTCCACGGT
CCGCGCTCCA TCGACCAGCC GGTGCTGGCC GCCGACGTGG CGCGCTACAT CGGCGAGCCG
GTCGTCGTCG TGGCCGCCGA GCACCCGGCG CTGGCGCGCG CCGCCGCCGA GCGCGTCCGC
GTGGTCTGGG ACCCGCTGCG TCCGCTGCAC GACCCGGACC AGTCCGCGAC CGCGCCGCCG
ATCCACCCGG ACGGCAACGT CCTGCACACC ACCACCCTGG CCTTCGGCAC CGAGCCGGCG
ACCCTGGCCG ATCCGGCGAG CGCCGAGTCC GCCGGGCGCA AGGTGATCTC CGGCGAGTAC
GTCTTCGACG GCGTCGCCGC GCGCCCCGCC GCCCCGGCCG TCGTGATCGC GGTCCCCAAC
GGCGAGCGCG GGATCGAGAT CTACGTCGCG ACCGTCTCCC CGCGCGGCGA CCGCGAAGTG
GTCGCGCAGT GTCTTGGCTT GCCAGTGGAG AAGGTGCATG TCATCCCGAC CCGCGTCGGC
GGCGCGGACA CCCACCGCGA GGACGTCGGG CTCCAGGTCC AGGCGGCGCT GCTGGCGATG
GCGACCAACC GCCCGGTCAA GGCCGTCGTG CCGCGCGACG CCCCGGCGCA TCCGGGACGC
CCGGCGGCGC AGCTGCGCTA CCGGCACGTG GTCGCCGACG ACGGCAGCCT GGTCGCGGTC
GAGGCCGACA TCCTGCTCGA CGGCGGCGCC TACGCCTCCA CCACGATCGA CATCCTCGAC
GAGGCCTGCC GCCTGGCGGT CGGGCCGTAC CGGGTCCCGA ACGTGCGGAT CTCCGGCCGC
GTGGTGCGCA CCAACAACCC GCCCGCGGGC CGGGTGCGCG GCGGCGGCGG AGCGCTGACG
TGTGCGGCGT ACGAGGCGCA GATGGACGCC GCGGGCACGG CGGTGGGCCT CGGCGGTCTG
GAGGTCCGGC TTCGCAACCT GCTGCGACCC GGCGATCTCG TTCCGGACGC GGGCGATCCG
CTCGGCAAGC CGGCCGCGGC GCCGGTCCCG ATCCCGGACT GTCTGCACGA GGTCCTGGAC
ACCCCGATGC CGAACTTCCC GCCGGGACCG GACATCCGCG AATACCCGGG AACCGTCGGC
CGGACCGGCG AGCTGACCCG GATCCGGCGC GGAGTCGGCG TGGCGCTCGG CATGGCCGAT
CTGTCGAACC CGACGCAGCT GGGGGAGTAC GCGACAGCTG TCGTGCTGGT CTCGATGACC
CCGGACGGCG CGGCCGCGAC CGTCGCCTGC TCGGCGGTGG AGACCGGCTC GGGTCTGCAC
GACCTGATCC GGGTCACGGT CGAGCGCACT CTGGGCATCG CGCCGGAGAT GGTCGCCATT
CGGGCGCCCG AGGACCCGGG TTCGCTGCCG TCGTCCTCGG CGGTCACCCA CCCGGCGTGG
GTGCACGGCA GCGCGGTCGA GACCGCGGCG AAGCAGGTCC GTTCGCGGCT TTTCCAATCG
CTGGCCGAGC AGATAGGGAT CGACGGCGGC CTGCTGAAGG TCGTCGACGG CTACCTGGTG
TCGCACGACG ATGTCTTCCA CCTTCCGCTG GAGGACGCCT ATCGGCAGTG CCTGCCGGCC
AGCCGCGTGG TGCGGGGCGA CGGCGAGTTC CGGATGCTGG CGATGCCCGC GCTCACCGGT
ACCTCGGACG CCGCCAGCGT CGCGGTCGGC GCCGTGCGCG CGGTGGTGGA CGTGGACACC
GAACTCGGTC TGGTGAACGT GATCCAGGTC GCCATCGCTC AGGACGCGGG CCGGGTCGCG
CTGCAGGACC GGGCCGAACA CCGGGTCGCC TCCGGAGCCG TGGCCGGCGC CGGCTTCGTC
CTGTCCGAGG GCTCGGACCT GCCTTTCGGC TGGGGTGAGC CCTCGACGAT GGACGCGCCG
GAGGTCGTGG TCGCCGCGTT GCTGGAGACC GCCGAGGAGG CCAAGGAAGA GATCGGCCCG
GACGGGCTTC CGCAGGCGGC GCCGCCGCTG GGGGGCATGA AACCGGTCGG CGACCTGTCG
GTGATGGCCA CGCCCGCCGC GGTGCTGGCC GCGATCCGGG ACGCCGTCGG CGATCCGCCG
GGCGGTTCAC CGCTTCGACT GCCGTTGAGA CCCGATCGCG CGTGGTGGGT TCTCAGTTGA
 
Protein sequence
MTEPKFPADL RAEGMLWMGV TRSPHASAAI RGLDMRAARA IPGVHAVLSA ADLPGYNFHG 
PRSIDQPVLA ADVARYIGEP VVVVAAEHPA LARAAAERVR VVWDPLRPLH DPDQSATAPP
IHPDGNVLHT TTLAFGTEPA TLADPASAES AGRKVISGEY VFDGVAARPA APAVVIAVPN
GERGIEIYVA TVSPRGDREV VAQCLGLPVE KVHVIPTRVG GADTHREDVG LQVQAALLAM
ATNRPVKAVV PRDAPAHPGR PAAQLRYRHV VADDGSLVAV EADILLDGGA YASTTIDILD
EACRLAVGPY RVPNVRISGR VVRTNNPPAG RVRGGGGALT CAAYEAQMDA AGTAVGLGGL
EVRLRNLLRP GDLVPDAGDP LGKPAAAPVP IPDCLHEVLD TPMPNFPPGP DIREYPGTVG
RTGELTRIRR GVGVALGMAD LSNPTQLGEY ATAVVLVSMT PDGAAATVAC SAVETGSGLH
DLIRVTVERT LGIAPEMVAI RAPEDPGSLP SSSAVTHPAW VHGSAVETAA KQVRSRLFQS
LAEQIGIDGG LLKVVDGYLV SHDDVFHLPL EDAYRQCLPA SRVVRGDGEF RMLAMPALTG
TSDAASVAVG AVRAVVDVDT ELGLVNVIQV AIAQDAGRVA LQDRAEHRVA SGAVAGAGFV
LSEGSDLPFG WGEPSTMDAP EVVVAALLET AEEAKEEIGP DGLPQAAPPL GGMKPVGDLS
VMATPAAVLA AIRDAVGDPP GGSPLRLPLR PDRAWWVLS