Gene Caci_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1470 
Symbol 
ID8332809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1672838 
End bp1674190 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content71% 
IMG OID644954618 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_003112234 
Protein GI256390670 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.407318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGA GCACCTCCTC CGACGTCCTG ACAGTGCACG GCGGAGCCGC CCTGTCCGGT 
GAGGTCCGGG TCCGGGGCGC CAAAAACCTG GTGCCCAAAG CGATGGTCGC CGCGCTGCTG
GGACACGGGA CCTCGGTCCT GCACAACGTG CCCCAGATCT CGGACGTGCG GATCGTCACC
GGTCTGCTGG AGGCGCACGG CGTCTCGGTG ACCCGGGGCG AGAGCCCCGA CACGCTGATC
CTGGACCCGG CTTCGGTCGA GGCGGCGAGC GACGCGGCGG TCGAGGCGCA CGCCGGGACC
AGCCGCATCC CGGTGCTGTT CTGCGGTCCG CTGCTGCACC GGCTGGGCCG CGCCTTCATC
CCGGACCTGG GCGGCTGCAA GATCGGCGAC CGTCCGATCG ACTTCCACCT GGACGCCCTG
CGCGCCTTCG GCGCGGTGGT CGAGAAGCGC CCCGAGGGCC TGCTGATCTC GGCGCCCGAG
CGGCTGCGCG GCACGCACAT CCGGCTGCCG TACCCCAGCG TCGGGGCGAC CGAGCAGGTG
CTGCTGACCG CGGTGCTGGC CGAGGGTGTG ACAGAGCTCT CCAACGCCGC GACCGAGCCG
GAGATCGTGG ACCTGATCGC GGTGCTGCAG AAGATGGGCG CCATAATCTC CGTCCACAAC
GACCGCGTGG TCCGCATCAT CGGCGTCGAC CGCCTGGACG GCTTCACCCA CCGCGCCGTC
CCGGACCGCC TGGAGACCGC GTCCTGGGCC TGCGCGGCCC TGGCCACCGG CGGCGACATC
CGCGTCATCG GCGCCTCGCA GGGCGAGATG ATGACGTTCC TGAACGTCTT CCGCCGCATA
GGGGGAGACT TCGAGGTCGA CGACGCCCCC GGCAACCCGT CGATCCGCTT CTGGCACTCC
GGCGGCCAGA TGCGCGCCCT GGCGCTGGAG ACCGACGTCC ACCCGGGCCT GTCCACGGAC
TGGCAGCAGC CGCTGGTCGT CGCGCTGACG CAGGCGCACG GCCTGTCGAT CATCCACGAG
ACGGTCTACG AGCAGCGCCT GGGCTTCACC GAGGCGCTGA ACCGCATGGG CGCCCAGATC
CAGCTCTACC GCGAGTGCCT CGGCGGCAGC GCCTGCCGCT TCGGCCAGCG CAACTTCATG
CACTCGGCGG TCATCTCCGG CCCGACCAAG CTGCACGGCG CCGAACTGAC CATCCCCGAC
CTGCGCGCCG GCTTCAGCTA CCTGATCGCC GCCCTCGCCG CCCAGGGGAC GTCCACCGTG
CACGGCATCA GCCTGATCCA CCGCGGCTAC GAGGACTTCG AGGCGAAGCT CTCCGCGCTG
GGCGCGGACG TGGAGCTGGG GATTCCGGCC TGA
 
Protein sequence
MALSTSSDVL TVHGGAALSG EVRVRGAKNL VPKAMVAALL GHGTSVLHNV PQISDVRIVT 
GLLEAHGVSV TRGESPDTLI LDPASVEAAS DAAVEAHAGT SRIPVLFCGP LLHRLGRAFI
PDLGGCKIGD RPIDFHLDAL RAFGAVVEKR PEGLLISAPE RLRGTHIRLP YPSVGATEQV
LLTAVLAEGV TELSNAATEP EIVDLIAVLQ KMGAIISVHN DRVVRIIGVD RLDGFTHRAV
PDRLETASWA CAALATGGDI RVIGASQGEM MTFLNVFRRI GGDFEVDDAP GNPSIRFWHS
GGQMRALALE TDVHPGLSTD WQQPLVVALT QAHGLSIIHE TVYEQRLGFT EALNRMGAQI
QLYRECLGGS ACRFGQRNFM HSAVISGPTK LHGAELTIPD LRAGFSYLIA ALAAQGTSTV
HGISLIHRGY EDFEAKLSAL GADVELGIPA