Gene Caci_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1462 
Symbol 
ID8332801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1665460 
End bp1666143 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID644954610 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003112226 
Protein GI256390662 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0836578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.704766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG CCCTGTTCAT CACCTGCTAC AACGACGCGC TCTTCCCCGA CACCGGCAAG 
GCGGTCACCG CCGTGCTGGA GCGGCTTGGC CACACGGTCG AGTTCCCGGC GGCGCAGACC
TGCTGCGGCC AGATGCATCA CAACACCGGC TATCGGCGCG AGGCGGACTC GCTGGTCGGG
GCGTTCAACG ACGCGTTCCG CGGCTACGAC GCCATCGTCA CGCCGTCCGG CTCCTGCGGC
GGCCACGTCC GGCACCACCA CCGGACCGAG ACGGCGCCGA ACGTCTATGA GTTCTCGGAA
TTCCTGGTGG ACGTCCTGAA CGTGACCGAC GTCGGCGCCT ACTTCCCGCA CCGCGTCACC
TACCACCCGA CGTGCCACAG CCTGCGCATG TTGCGCGTCG GCGACAAACC GTTGCAGTTG
CTGCGCGCCG TGGAGGGGAT CGACCTGGTG GAGCTGCCGG AGGCGGAGTC GTGCTGCGGG
TTCGGCGGGA CGTTCGCGAT GAAGAACTCT GAGACCTCGG TGGCGATGCT GCAGGACAAG
ATGGGCAATG TGCGCAAGAC CGGCGCGCAG ACGCTGTGTG CCTCCGACAA CTCCTGCCTG
ATGCACATCG GCGGCGGACT GAGCCGGGTC AAGTCCGGCG TCAGGACCCT GCATCTCGCT
GAGATCTTGG CGGCGACGCG ATGA
 
Protein sequence
MRVALFITCY NDALFPDTGK AVTAVLERLG HTVEFPAAQT CCGQMHHNTG YRREADSLVG 
AFNDAFRGYD AIVTPSGSCG GHVRHHHRTE TAPNVYEFSE FLVDVLNVTD VGAYFPHRVT
YHPTCHSLRM LRVGDKPLQL LRAVEGIDLV ELPEAESCCG FGGTFAMKNS ETSVAMLQDK
MGNVRKTGAQ TLCASDNSCL MHIGGGLSRV KSGVRTLHLA EILAATR