Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1453 |
Symbol | |
ID | 8332792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1656436 |
End bp | 1657131 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954601 |
Product | GntR domain protein |
Protein accession | YP_003112217 |
Protein GI | 256390653 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTGA CCGACGAGGC GATCGAGAAG ATCAAAGAGA TGATCATCAA GGGCCGGCTG CGGCCCGGTG ACCGCCTCCC CAAAGAGGCG GACCTGGCCG CGGAGCTGGG ACTTTCGCGC AGCTCGCTGC GTGAGGCGGT CCGCGCGCTG TCGCTGATCC ACGTCCTGGA CGTCCGCCAG GGCGACGGCA CTTACGTCAC CAGCCTGGAG CCGGCGCGGC TGCTGGAGGC GATGAGCTTC GTGGTGGACT TCCACCGCGA CGACACGGTC CTGGAGTTCC TGGAGGTGCG CCGCATCCTG GAGCCCGCCG CCACCGCCAT GGCCGCGCAG CGCGTCACCG ACGAGGAGGT CGCCGAGCTG CGCGAGCACT TGGCGCTGAT CGGCAACGCT CCCACGGTCG AGGACCTGGT GCGCAACGAC CTGGAGTTCC ACAGCCGGAT CGCGGCGTGC TCGCGCAACG TGGTGCTGGG GTCGCTGCTG GACAGCCTGT CGGGACCGAC GACGCGCGCG CGGGTCTGGC GCGGGCTGAC GCAGGAGGGC GCGCTGACGC GGACGCTGAT GGAGCACACG GCGATCCTGG ACGCGCTGGC CGAGCGGGAC TCCGAGGGCG CGCGGGCGTG GGCGACGATC CACATCGTGA GCATCGAGCA GTGGCTGCGG AACACGTTGA GCGAGAAGCG GTCGACGCAG GGCTGA
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Protein sequence | MAVTDEAIEK IKEMIIKGRL RPGDRLPKEA DLAAELGLSR SSLREAVRAL SLIHVLDVRQ GDGTYVTSLE PARLLEAMSF VVDFHRDDTV LEFLEVRRIL EPAATAMAAQ RVTDEEVAEL REHLALIGNA PTVEDLVRND LEFHSRIAAC SRNVVLGSLL DSLSGPTTRA RVWRGLTQEG ALTRTLMEHT AILDALAERD SEGARAWATI HIVSIEQWLR NTLSEKRSTQ G
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