Gene Caci_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1440 
Symbol 
ID8332779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1640670 
End bp1641512 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID644954588 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_003112204 
Protein GI256390640 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0855011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC CTTCCCGTGT CCTCGTCATC GGCATCGACG GGGTGCGTCT CGACGTGCTC 
CGCAGCGTGG CGACGCCGCA TATCGACGCG GTCGCCGCCG AGGGCTTCCT GGCGCCGGTG
CGGATCGACG ACGCGACGCC GACCTGGTCC GGTCCGTGTT GGGCGACGAT CGCGACCGGG
GTCTCGGCGG CGAAGCACGG GATCATGCAC AACGTCTTCA CCGGGCACCG GCTCACGGAG
TATCCGGACT TCCTGACGCT GGCCTCGCTC GCGGGGAAGC GGACGTACCT GTCGGTCGGG
AGCTGGGAGC CGCTGGCGAC GGCGGCGTGC GGGGGACCGT TGTTCGCGGC GCCGGACCGG
GTGACGTTCA CGTCCTACGG GCTGGACTGC GAGCGCGGGG ACGAGGCGGC GACGGTCGAC
GCCGAGCGGG AGATGCTGGC GGCGGACTAC GACGTGGCGT TCGTGTATCT GGGGGACGTC
GACGAGACCG GGCACGAGCT CGGGGTCGGC GCCGAGTACC GCGCGGCGGT GGAGCGTGCC
GACGCGCGGG TCGGACGGCT GGTGGCGACG GTGCGGGCGC GCGCGGCGTA CGCCGCGGAA
CGGTGGACGG TGATCGTGGT GACGGACCAC GGTCACGTCG ACGAGGGCGG CCACGGCGGC
GACAGCGATC TGGAGCGCAC GGCGTGGATC GCCGCCAGCG GGCCGGGGAT CGCGGCGGGC
GCGGAGATGG GGACGCTGCG GCATGTGGAC GTCGCGGCGC ATGTGTATGA GGCGGTCGGG
CTGAGCGAGG CGATGGCGGG GCTTCCTTTG GAGGGGAAGC CTTTTGGGGC GGTCTCGGTC
TGA
 
Protein sequence
MTSPSRVLVI GIDGVRLDVL RSVATPHIDA VAAEGFLAPV RIDDATPTWS GPCWATIATG 
VSAAKHGIMH NVFTGHRLTE YPDFLTLASL AGKRTYLSVG SWEPLATAAC GGPLFAAPDR
VTFTSYGLDC ERGDEAATVD AEREMLAADY DVAFVYLGDV DETGHELGVG AEYRAAVERA
DARVGRLVAT VRARAAYAAE RWTVIVVTDH GHVDEGGHGG DSDLERTAWI AASGPGIAAG
AEMGTLRHVD VAAHVYEAVG LSEAMAGLPL EGKPFGAVSV