Gene Caci_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1435 
Symbol 
ID8332774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1635021 
End bp1635764 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID644954583 
Productphage shock protein A, PspA 
Protein accessionYP_003112199 
Protein GI256390635 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG TCATGAAGCG GATGAAGCTG GTCGTCGAGG CCAAGGCCAA CGCGGCCATG 
GAGCGCCGCG AGAATCCGGT CGAGATGCTC GACCTGTCCT ACGAGAAGCA GTTGGAGCTG
CTGCAGAAGG TGCGCCGCGG GGTCGCGGAG GTGGCGACCA GCCGCAAGCG CCTGGAGATC
CAGCTCAAGA ACCTCCAAGC CGACTACGAC AAGCGCGGCG AGCAGGCCAA GCGCGCCCTG
GAAGTGGGCC GCGAGGACCT CGCCCGCGAA GCGCTGGTCC GCCGCGCCCC GGTCCAGCAG
CAGATCGAGG ACATGACGCT GCAGTACAAC GCCCTGCAGG GCGAAGAGGA GAAGCTGGTC
CGCGCCTCCC AGAGCCTGCA GCAGAAGGTG GACGCCTTCC GCACCAAGAA GGAGACCATC
AAGGCCACCT ACGCCGCGGC CCAGGCGACC ACCCAGATCG GCGAGGCCTT CAGCGGCCTG
TCCGAGGAGA TGGGCGACGT CAACATGGCC ATCGAGCGCG CCGAGAACAA GACGGCGCAA
CTCCAGGCCC GCGGCGCCGC CCTCGACGAA CTCACCGCCT CCGGCGTCCT GAACGACCCC
ACCGGCTACG GCAAGGACGA CATCACCCGC GAGCTCGAAG CCCTCTCCGC CGGCTCCGGC
GTGGAGAACG AGATGTCCCG CCTGCGCAAC GAGATCGCCG CCGGCGACTC GAAGAAGCAG
ATCGGCCCGG GCGCGGGGGC TTAG
 
Protein sequence
MSGVMKRMKL VVEAKANAAM ERRENPVEML DLSYEKQLEL LQKVRRGVAE VATSRKRLEI 
QLKNLQADYD KRGEQAKRAL EVGREDLARE ALVRRAPVQQ QIEDMTLQYN ALQGEEEKLV
RASQSLQQKV DAFRTKKETI KATYAAAQAT TQIGEAFSGL SEEMGDVNMA IERAENKTAQ
LQARGAALDE LTASGVLNDP TGYGKDDITR ELEALSAGSG VENEMSRLRN EIAAGDSKKQ
IGPGAGA