Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1435 |
Symbol | |
ID | 8332774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1635021 |
End bp | 1635764 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954583 |
Product | phage shock protein A, PspA |
Protein accession | YP_003112199 |
Protein GI | 256390635 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG TCATGAAGCG GATGAAGCTG GTCGTCGAGG CCAAGGCCAA CGCGGCCATG GAGCGCCGCG AGAATCCGGT CGAGATGCTC GACCTGTCCT ACGAGAAGCA GTTGGAGCTG CTGCAGAAGG TGCGCCGCGG GGTCGCGGAG GTGGCGACCA GCCGCAAGCG CCTGGAGATC CAGCTCAAGA ACCTCCAAGC CGACTACGAC AAGCGCGGCG AGCAGGCCAA GCGCGCCCTG GAAGTGGGCC GCGAGGACCT CGCCCGCGAA GCGCTGGTCC GCCGCGCCCC GGTCCAGCAG CAGATCGAGG ACATGACGCT GCAGTACAAC GCCCTGCAGG GCGAAGAGGA GAAGCTGGTC CGCGCCTCCC AGAGCCTGCA GCAGAAGGTG GACGCCTTCC GCACCAAGAA GGAGACCATC AAGGCCACCT ACGCCGCGGC CCAGGCGACC ACCCAGATCG GCGAGGCCTT CAGCGGCCTG TCCGAGGAGA TGGGCGACGT CAACATGGCC ATCGAGCGCG CCGAGAACAA GACGGCGCAA CTCCAGGCCC GCGGCGCCGC CCTCGACGAA CTCACCGCCT CCGGCGTCCT GAACGACCCC ACCGGCTACG GCAAGGACGA CATCACCCGC GAGCTCGAAG CCCTCTCCGC CGGCTCCGGC GTGGAGAACG AGATGTCCCG CCTGCGCAAC GAGATCGCCG CCGGCGACTC GAAGAAGCAG ATCGGCCCGG GCGCGGGGGC TTAG
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Protein sequence | MSGVMKRMKL VVEAKANAAM ERRENPVEML DLSYEKQLEL LQKVRRGVAE VATSRKRLEI QLKNLQADYD KRGEQAKRAL EVGREDLARE ALVRRAPVQQ QIEDMTLQYN ALQGEEEKLV RASQSLQQKV DAFRTKKETI KATYAAAQAT TQIGEAFSGL SEEMGDVNMA IERAENKTAQ LQARGAALDE LTASGVLNDP TGYGKDDITR ELEALSAGSG VENEMSRLRN EIAAGDSKKQ IGPGAGA
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