Gene Caci_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1428 
Symbol 
ID8332767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1625931 
End bp1626632 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID644954576 
ProductMethyltransferase type 11 
Protein accessionYP_003112192 
Protein GI256390628 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.258196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCG ACACCTCGTA CCACGGCGAC CTCGGCGACT TCTTCGCCGG GACCGGCCAG 
CAGCATCCGA CCAATGCCTA TATCGATCGG CCGGCGATGC TCGAGCTGAT CGGGGATGTG
GCGGGGCGGG ATGTGCTCGA CGCGGGGTGC GGGCCGGGGT TCTATGCCGC GGCGATGGCG
GATCGGGGCG CCAGGGTGAC GGCGATCGAC GGCAGTGCGG AGATGGTGCG GATCGCGGCG
CGGGCGGCGG GGGAGCGGGG GACGTTCGCG CGGCATGATC TGGAGCTGCC GTTGCCGTTC
GCGGATGCTT CGTTCGACCT GGCGGTGATG GCTTTGGTGT ACCACCACCT GTACGCGCGG
GGGCAGGTGT TGGCGGAGCT GCGGCGGGTG GTGCGGCCGG GTGGGCGGTT GCTGGTCTCC
ACGACGCATC CGATGAGTGA GCAGCGGTGG CTGGGCGGTT CGTACTACCA GGGTGGGCGC
GTGGACGCGC CGATCGGCGG GCCCGGGAGC GGCTACACGA TCAGCTTCGA GCGGATGACG
GTCGAGACGT TCGTGAACGA GATGCTGGAC GGCGGGTTCG TGCTGGAGCG GTTGGTGGAG
CCGCGGCCGT CGGTGGCTTT GCGGGACGTC GATCCGGAGA AGTTCGCGCA GCTCGACGTC
AAGCCGACGG TGCTGGCGGT GGCGTTGCGG CGTCCGGCGT AG
 
Protein sequence
MPTDTSYHGD LGDFFAGTGQ QHPTNAYIDR PAMLELIGDV AGRDVLDAGC GPGFYAAAMA 
DRGARVTAID GSAEMVRIAA RAAGERGTFA RHDLELPLPF ADASFDLAVM ALVYHHLYAR
GQVLAELRRV VRPGGRLLVS TTHPMSEQRW LGGSYYQGGR VDAPIGGPGS GYTISFERMT
VETFVNEMLD GGFVLERLVE PRPSVALRDV DPEKFAQLDV KPTVLAVALR RPA