| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1426 |
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| Symbol | |
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| ID | 8332765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1624015 |
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| End bp | 1624593 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954574 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003112190 |
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| Protein GI | 256390626 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.267228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGACATCG ATGACGAACA GCGCTTCCGG GAGTTCGTCG GCGCCCGGTC GAAAGCGCTG
CTGCAGACCG CGTATCTGCT GACCGGCGAC TGGGAGCATG GTCGTGACCT GGTGCAGAGC
GCGCTCGCGG GGGTGGCGCG CAGATGGAGC CAGCTGGCCG ATCCCAGTCA AGCCGAGGCC
TATGCCCGCA AGGCGATCTA CCACGCGCAC GTCGACCGCA CGCGGCTGAT GTCGTGGCGG
CGGGAGCGGA CGACGGCTTC ACCGCCGGAC ACGGCCGCCG CGCGGTCGGA CCCGGCGGAC
CTCGTCGCCT CGCGGCGGGA CCTGATCGCG GCGCTGCGGC AGCTGCCGAG GGGGCAGCGT
GCGGTGGTCG TGCTGCGGTA CTTCGAGGAC CGGACCGACG AGGACATCGC TGAGGTGCTG
GGGATCTCGA CCGGGACCGT GCGCAGCCAG CATCACAAGG CGTTGAAGGC GCTGCGCGTC
AGCGCGAGCA TCGCGGTGGA CGACGGCGAG CAGGACATCG CGAAGGACCT TAAGAAGGAC
ACAGCACTGA ACACAGTGAA GGAGGAGGCG GCATGGTGA
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| Protein sequence | MDIDDEQRFR EFVGARSKAL LQTAYLLTGD WEHGRDLVQS ALAGVARRWS QLADPSQAEA
YARKAIYHAH VDRTRLMSWR RERTTASPPD TAAARSDPAD LVASRRDLIA ALRQLPRGQR
AVVVLRYFED RTDEDIAEVL GISTGTVRSQ HHKALKALRV SASIAVDDGE QDIAKDLKKD
TALNTVKEEA AW
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