Gene Caci_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1414 
Symbol 
ID8332753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1609583 
End bp1610842 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content63% 
IMG OID644954562 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_003112178 
Protein GI256390614 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.106105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0448096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTC CTGCTGATCG GATCCCACCG CCGCGAACCG CCGCCACTCC GGCAGCGGGA 
ACCAGCGTCG AGTTGTTCAG TGGCGGGGGC GGCCTCGCGT TGGCGATGCA TCGAGCGGGC
TTCCAGCATC TGATGTGCAA CGAGTTCGCG CCGCGGGCGT GCGAGACGCT GCGAATGAAC
AGTGAAGCCC TAGGACGTCC GCAACTGATC GAGGGCGATA TCGCCACCGC CGTGACTGAC
GAGCGTCTCG CGGAACTCAC TGGCAAGGTC GACGTCGTCG CTGGCGGGCC GCCATGCCAA
CCGTTCAGTC TTGGTGGCGA CCACCGGGGT CACGAGGACA GGCGAAACAT GTTCCCTCAG
CTCTTCAGAG TCGTGCGGGG GACTCGCCCA AAGGCGATCA TCTGCGAGAA CGTCCGGGGC
TTGTTGCGCC CTTCGTTCAA GCCATACTTC GACTACATCC TTCGGGAGCT GGAGGCTCCT
TTCGAGCAAC GCGTGGACGG TGAGGTTTGG ACAGAGCACG ACGAGCGCTT GCGAAAGGCG
CTGCGAGGCC GCGGTGGCGA ACCCTCGGAG CGATATGTGG TCAAAGCGAT TCCTGTCAAC
GCCGCCAACT TCGGAGTGCC TCAGGTTCGC TACCGCGTGA TCATCGTCGC TTTCCGTGCT
GATCTGAGCG TCGCGTGGAC GCCGCCGGCG GAGACGCATA GCCAAGCGTT GCTCGAATTG
GCTCAATCCA CTGGCGAGTA CTGGGACGAG CATCCCGAGG CGCCGCGACC TGACACGCCA
GGTGGGTTCG TCCAACAGCG ACTCGATGGT GGGCCGGAGG ATGGAGGGAC GCGGCGGTGG
CGTACGTTAC GGGACGCTCT AAAGGACCCA ATGCCACTTC CTGAGCCGAT CAACGGCAAG
AATCGCGCGG GTTTCACTTA CCACATCGGT ATCCCTAACG CCCGCACGTA CAAGGGCCAC
ACGCCAAACC GACGTGACTG GCCGGCCAAG ACCGTCAAGG CTGGAGTCCA TGGTGTACCG
GGAGGCGAGT CTGTGATCGA GAATGACGAT GGCACACATC GCTACATGAC TGTGCGCGAG
ACCGCGCGAG TCATGACGTT CCCCGATACT TGGAAGCTGG ATGGACCACG GACCGAGCAA
ATGCGGCAGC TTGGTAACGC TGTGCCGGTG CTGCTTGGCA ACGTGTTCGC GGATTCGGTC
GCCGCGGCGC TCGCGGCGAA CATCGAGCCT GAGCGGCGAG TCGATGAGCG AATGGCGTGA
 
Protein sequence
MHTPADRIPP PRTAATPAAG TSVELFSGGG GLALAMHRAG FQHLMCNEFA PRACETLRMN 
SEALGRPQLI EGDIATAVTD ERLAELTGKV DVVAGGPPCQ PFSLGGDHRG HEDRRNMFPQ
LFRVVRGTRP KAIICENVRG LLRPSFKPYF DYILRELEAP FEQRVDGEVW TEHDERLRKA
LRGRGGEPSE RYVVKAIPVN AANFGVPQVR YRVIIVAFRA DLSVAWTPPA ETHSQALLEL
AQSTGEYWDE HPEAPRPDTP GGFVQQRLDG GPEDGGTRRW RTLRDALKDP MPLPEPINGK
NRAGFTYHIG IPNARTYKGH TPNRRDWPAK TVKAGVHGVP GGESVIENDD GTHRYMTVRE
TARVMTFPDT WKLDGPRTEQ MRQLGNAVPV LLGNVFADSV AAALAANIEP ERRVDERMA