| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1404 |
|---|
| Symbol | |
|---|
| ID | 8332742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1595904 |
|---|
| End bp | 1598054 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644954552 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003112168 |
|---|
| Protein GI | 256390604 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCGGA AGATCGGCAG CAGGTACACC ATCACCGCGG TGCTGGGCCG CGGGACGTGC
GGCACCGTGT GGGAGGGCGA GGGTCCCGAA GGGCCGGTCG CCGTCAAGCT GCTGCGCGAG
GACCTGGCCG CCGACCAGAC CCTGATCGCG CGGTTCGTGC AGGAGCGCAC CGTCCTGACC
TCGCTGCAGC ACCCGAACGT GGTCGGCGTG CGCGACCTGG TCGTCGACGG CTCCGACCTG
GCCCTGGTCA TGGACCTGAT CCGGGGCTCG GACCTGCGCC ACCTGCTGGA CGCCGAGCAC
GCGCTGCGCC CGCAGCTGGC CGTGCTGATC GTGGCCGGCG TCGCCGAGGG CCTGGCGGCC
GCGCACGCCC AGGGCATCAT CCACCGCGAC GTGAAGCCCG AGAACATCCT GCTGGACCAC
TCCGGCGGCG CCCTGGTCCC GCGACTGGCC GACTTCGGCA TCGCGCGCCT GGTCGACGGC
CCGCGCCGGA CCCGCGCCAC CCGGATCATC GGCACTCCGG ACTACCTGGC GCCGGAGGTC
ATCGAGGGCC TGCAGCCGGG CCCGGCGGTG GACATGTACG CCCTGGGCAC CGTGCTGTTC
GAGCTGCTGG CCGGCTGGAC GCCCTTCGGC GGCGGCCACC CCGGCGCGGT GCTGCGCCGG
CACGTCACCG ACAAGGTCCC GCCGCTGCCC GGGGTCCCCG GCCCGCTGGC CGCGCTGGTC
GCCTCGTGCC TGGCCAAGGG TCCGGCGGCG CGGCTGACCG CCTCGGAGTT CGCCGCGCGG
CTGCGCGATC TGGCGCCGCT GCTGGAGGAC ATGCCGCCGC TGGCCATCCC GGACCCGCGC
GAGGGCGGCT GGGACGTGCG CTCCTCGGCG CGCGCCAGCC AGCACGGCGG CCGCACCCCC
ACGATCGACC CGATCCCGAT GCGGCACAGC GGCATCGTCC CGCTGGTGCA CAACGCCGAG
GTCAAGGACG AGGACGAAGA CACCCACCTG AACCTGATGC GGCCGATCCG CGAGCGGGAC
CAGGGCGAGG TGCGGCGGCG TTCGGGCACG GGCAGTTACG ACGTCTCGGA GCTGCGCGCC
GAGCGCGCCA ACGCGGCCGC CGCGGGGTCC AAGCGTCCCA AGTGGATCGC CGCGACCGCC
GCCGCTCTGC TCGTCGGCGG AGCCGCGGCT GCGATCGCCA TGGGGATGTC CGGGGGCGAC
GACCCCGCGA AGGACAACAA GGCGCACTCT CAGACACCCG CCGGATCGAC GACCTCTTCT
GTGTCGTCGC CTCCCGGGAC CACTACGCGC TCTACCGCAG TGGGGCTGAG CTTCCAGCCG
CCACATGAGC TGCCTCCGGT GCCGGTGAGT ATCCAGGGTG CTCCGCGTAC TGCAGTCTTT
AAGGACGCTT CCGGTACGGC GACTCTCTTT GTGTTCGTCA CAGGTACCGA CGACACCGTC
TGGTACCTCC CTGGGGAGAA CAGCCACTCC TGGCTGCCGT TGCACGGACT GAAGACAGGT
ACGGAGCCCG CTGTAGTAGC CACTAGCGCG GGACGCCTAG AGCTGTTCGC TGTACGGAGC
GACGGAGTGG TTCACCAGCG CAGCTACACA GCCGGCGGCT GGTCGGCGAA GTGGGTCGCG
ATCGGCACCG GGAAGGTGCA CGGTGCTCCC GGAGCGCTGG CGAACCCTGA CGGCTCCGTG
GTGGTCGCCG CGGTCGGGAG CGGTAAAACG CTGATGACTA CTACGGGGAC TCCTAGTGGG
GCGTCCGGTG CGTTCTCATT TGGCGAGTGG CAGGCGGTCT CGACGGTCGG CGACCTCGGC
TCGGGGGTCG CGCTGACGCC GAGTCCGTCG ACGTCCGGCT ACACCGCGTA CGTGCCGCGC
GCCTCTGACG ACGGCATCAT GGCGATCGCA TATGCGAACA AACTGTGGGG AACGCCTGTG
CAGACCCCAC TGTCGGGTCT GCCCACAGCA GCGACTTCCG GGGACGGTAC GTCCTATGTG
TTCGTGCGCT CCGTCGGCGG TGCCGTCAAG GCCATGAACG GGAACGGCCA GGCCGGTGCC
GGTGGACTTC AGTCCGTGCT CCCGCCCGGC GCCACGGAGA TGCCCGACGG ACGGCTCGCG
GTCGTCACCG CCGCATCTTC TACGAAGCTG CGGGTCTCGT ACTCCGGATA G
|
|---|
| Protein sequence | MARKIGSRYT ITAVLGRGTC GTVWEGEGPE GPVAVKLLRE DLAADQTLIA RFVQERTVLT
SLQHPNVVGV RDLVVDGSDL ALVMDLIRGS DLRHLLDAEH ALRPQLAVLI VAGVAEGLAA
AHAQGIIHRD VKPENILLDH SGGALVPRLA DFGIARLVDG PRRTRATRII GTPDYLAPEV
IEGLQPGPAV DMYALGTVLF ELLAGWTPFG GGHPGAVLRR HVTDKVPPLP GVPGPLAALV
ASCLAKGPAA RLTASEFAAR LRDLAPLLED MPPLAIPDPR EGGWDVRSSA RASQHGGRTP
TIDPIPMRHS GIVPLVHNAE VKDEDEDTHL NLMRPIRERD QGEVRRRSGT GSYDVSELRA
ERANAAAAGS KRPKWIAATA AALLVGGAAA AIAMGMSGGD DPAKDNKAHS QTPAGSTTSS
VSSPPGTTTR STAVGLSFQP PHELPPVPVS IQGAPRTAVF KDASGTATLF VFVTGTDDTV
WYLPGENSHS WLPLHGLKTG TEPAVVATSA GRLELFAVRS DGVVHQRSYT AGGWSAKWVA
IGTGKVHGAP GALANPDGSV VVAAVGSGKT LMTTTGTPSG ASGAFSFGEW QAVSTVGDLG
SGVALTPSPS TSGYTAYVPR ASDDGIMAIA YANKLWGTPV QTPLSGLPTA ATSGDGTSYV
FVRSVGGAVK AMNGNGQAGA GGLQSVLPPG ATEMPDGRLA VVTAASSTKL RVSYSG
|
|---|
| |