| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1388 |
|---|
| Symbol | |
|---|
| ID | 8332726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1577504 |
|---|
| End bp | 1578241 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644954536 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_003112152 |
|---|
| Protein GI | 256390588 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTGT CATTGCGGCA CGGTCGATAC GGTCGATGGG CAGTGCTGGC GGCGGCCGGC
GCGCTGGCGC TGGCGGGGTG CAGCTCGTCC GGGAGCGCGA AGGGTTCGAC CGGCGGCTCG
GCGCCGCAGG GTGCCCCGTC GAGCACGAGC ACGGCTTCGA GCGCGGCGTC CGGAGGGACC
GCGGCCGGCA AGCAGTGGTC CAAGGAACCG GCGATGACCA TCGACGCGAG CAAGAAGTAC
ACGATGGTGC TGCACACCTC GCAGGGCGAC ATCACCATCG CGATGGACGC CGCCAAGGCG
CCGCACACCG TGAACTCGTT CAACTTCCTG GCCGGGCAGC ACTTCTTCGA CGGCAGCTAC
TGCCACCGGC TGTCCACCTC CGCCGGTCTG CAGATGCTGC AGTGCGGCGA CCCGACGGCC
GGCGCCACGC CGAAGGACAC CGACGGCTCC AACGGTCCCG GCTACACCTT CCAGGACGAG
AACCTCTCCG GCGCCACCTA CCCGGCCGGC ACCGTCGCGA TGGCCAACGC CGGCCCGAAC
ACCAACGGCA GCCAGTTCTT CCTGGTCTTC GGCGACAGCC AGCTCGCGCC GAACTACACC
CCCTTCGGCA CCATCACCGA CGGCATGGGT GTCCTGGTCC ACGTCTCCTC CGGCGGCATC
AGCAACCCCG GTCAGGACGG CACCGGCCGC CCGACGGTCC CGGTCGAGCT GAAGTCGGTC
TCGGTCACCG CGGGCTGA
|
|---|
| Protein sequence | MRVSLRHGRY GRWAVLAAAG ALALAGCSSS GSAKGSTGGS APQGAPSSTS TASSAASGGT
AAGKQWSKEP AMTIDASKKY TMVLHTSQGD ITIAMDAAKA PHTVNSFNFL AGQHFFDGSY
CHRLSTSAGL QMLQCGDPTA GATPKDTDGS NGPGYTFQDE NLSGATYPAG TVAMANAGPN
TNGSQFFLVF GDSQLAPNYT PFGTITDGMG VLVHVSSGGI SNPGQDGTGR PTVPVELKSV
SVTAG
|
|---|
| |