| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1385 |
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| Symbol | |
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| ID | 8332723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1572079 |
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| End bp | 1575639 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954533 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003112149 |
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| Protein GI | 256390585 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCTGA CCGTATCGAT CCTGGGCCCG CTGGAGATCC GTGTCGACGG CGCGCCGGTG
GCCCTCGGCG GCGCGCGTCT GCGGACCCTG ATGTCCCGGC TCGCGCTGGA CGCCGGGCGC
GCGGTCACCG TCTCGGCGCT CGTCGACGCG CTGTGGGGCG ACGAGCCTCC GGAAGGCGCC
GCGAACGCGC TGCAGTCCCT GATCTCGCGT GTCCGCAAAG TCCTCGGCGA TCCCGCGCTG
CTCGCCTCCG CTCCCGGCGG ATACCGGCTG GCGATCGCGC CGGAGTCGGT GGACGCGATG
CGGTTCGAGT CGCTGTCGCG CTCGGGCCGT GAGGCGCTGC GGGCCGACGA CCCCTCGGCG
GCGCGCGCGA CGCTGCGCGA GGCGCTGGCG CTGTGGCGGG GTCCGGCCCT GGCCGACGTC
GCCGACGCGG CGTTCGCGGT GGCGCCGGCC GCACGGCTGG ACGAGCTGCG GCTCGCCGCG
CTGACCGACC GGCTCGACGC CGAGCTGCGG CTGGGACACG CCGCCGAGGC GCTGGCCGAA
CTCGAGGCGC TCGGCGCCGA ACACCCGCTG CGCGAGAACA TCGCCGCGCT GCATGTCAGA
GCCCTGTACG CGGTGGGACG GCAGGCCGAC GCGCTGGCCG TCTACGAACA AGTGCGGCGG
GCCCTGGCCG ACCAGCTCGG CATCGACCCG TCCAAGGACC TGGCCGAAGT CCATCTCGCG
GTGCTGCGCA GCGACCCCGC CTTGGCGCCG CCTGCTCTGG AACACGCGCC GCGCACGAAC
CTCAAGTCCC GCCTGACCAG CTTCGTCGGG CGCGACGAGG AGGTGACCCG GATCGGCAAG
ATGCTGGACG CCTCCCGCCT GGTGACGCTC GTCGGCCCGG GCGGCGCGGG CAAGACCCGG
CTGGCCGGCG AGGCGGCGCA GCGCGTCCTG GAACGCTTCC CTGACGGCGC CTGGCTCGCC
GAACTCGCGC CGGTCACTGA TCCCGGCGAG GTACCGCAGG CGGTGCTGTC GGCGCTGGGT
CCGCGCGAAA GCCGGATGAT GAGCAGCAAC GGCTCGCCGG CCGCGGCCGC CGCCCTGCTG
CGCAGCGCCG AGGGCCACCT GATCGAGACG CTGGCCGAGA AGCGGATCCT GCTCATCCTC
GACAACTGCG AGCACCTGGT CGGCGCCGCC GCCGGGCTCG CCGAGACGCT GCTGGGCCAC
GCGCCGGGGC TGCGCGTCCT GGCCACCAGC CGTGAACCGC TGACCATCGA CGGCGAGAGC
CTGTTCCCGG TGCCGCCGCT GGGATTGCCG GACGCGGAGG ACTTCGACGA GGCCGGTGCG
CGGGCCCGCG AGTCGCGCCG GCTGGCGGCG ATGGGCCGGG CGGACAGCCG GAGCCGGACT
CCGGCGGACG GAAACGGGAG CGGGAGCGGG AACGGGAACG GGAACGGGAA CGGGCTTGGG
AACGGGATCG GCGGCGAGAC CTGCGATCCG ACGACCGGTG GCGGGACGTA CAGCGTGACC
GACGAAGCCG TGATCTGCGC ACCGTCCGGC GGATCCGGAA GCCTCGCCTC GGCGGGCAGA
AACCGAGCCC CAGCAAGCGA ATCCGCGGAC CCTTCTACCT ACACCGTCGC CGACACCGTG
CTGGCCTACC CCGCCGTCCG GCTGTTCGCC GACCGCGCCG CCGCTGTCGT GCCGGACTTC
GCCGTCGACG CCGACACGCT CCCCGACGTG ATCCGCATCT GCCGCAGCCT GGACGGACTG
CCGCTGGCGA TCGAACTCGC CGCCGCGCGC CTCCGAACCC TGCCGCTGCA CCAGATCGCC
AGCCGGCTCA GCGACCGGTT CCGGCTCCTG ACCGGCGGCA GCCGCACTGC CATGCCGCGG
CATCAGACGC TGCGCGCCGT CGTCGCGTGG AGCTGGGAGC TGCTCTCCGA CGACGAGCGC
GACCTCGCCG AGCGCCTGGC GGTCTTCCCC GGCGGCGTCA CCGCCGCGGC CGCCGCCGCG
GTGACCCCCG GCTTGGACGC CGATTCCGCC TTCGACCTGC TCTCCGCGCT CGTGGACAAG
TCGCTGCTGC AGTCGGTGCC GACCGAGCCC GGTCAGGACC CGCGCTTCCG CATGCTGGAG
ACGCTGCGCG AGTACGGCGC CGACCGCTTG AGCGAGACCG GCCGGCTGGC CGTCACCAGG
CGCGCGCACG CGGCGTTCTT TCTCGAACTC GCCGAGACCG CGGAGCCGCA GCTGCGGCGC
TCGCAGCAGA TGGCGTGGCT CAAGCGCCTC AACGCCGAGC GCGACAACAT CTTGGCCGCA
CTGCGGTTCG CCGCCGCCGA CGAGGACGCC GACACCGCGA TCCGCCTGGC CGCCGCGATG
TCCTGGTACT GGACGCTCGG CGACCAGAAC CAGGAGGGCC GGTCCTGGAC GCGGTTGGCG
TTGCAGGTTC CGGGACCCTC GCCGAAGGAG GCGCGCGCGA TCGTCTCGGT GATGGCGCGC
ATCACCTCGG TCATGGAGGA CTACCTCTGG GAGGAGGTCC CTCGGATGAC CCGCGAGATC
GCCGCGGAGA TCGCCGCCCT GGGCGAGATC GAGCATCCGC TGCTGGCGCT GGCGGCGGTC
ATCGCGCCGA TGCTCAGCGA CGACCGGGAG CAGCTGAACG CCGCGGTCGA GAAGTACGGC
GTGCACCCGG ATCCGTGGGT CGGCGCGATG CTGCACCTGA TGCGCGGCAT GTCCGCGGAG
AACGCCGGGG TCCGCGCGCC GGTGCGTGCC GACCTGGAGC ACGCTTCCGC CGTCTTCGAA
GAGCTCGGCG ACCGCTGGGG TCTGTCGGCC GCCCTGAACG GCCTGGCCTC GCTGGCCGTC
ACCGACGGCG ACGACGAGAC GGCCCTGCGG CTGCAATCCG AGGCGCTGGA ACTGATCCAG
GAGATCAACG CCTTCACCAG CGCCGCGCAG ATCCAGATCG GCCGGGCCCA ACTGCTCACC
CGGCTCGGCC AGACCGACGC CGCCCGCGCG CTGCTGGAGG AGGTCCTGGA GTCGGCGCGG
CGCTCGGGTT CGCAGATGAG CTGCTTCGTG GCGATGCTCG GGCTCAGCGA ACACCACCGG
CAATCCGGCG AAACCGACCG CGCCTGGCAT TACTTGAACA TGGCCAGTGT GGAGTTCATC
GACAGCTGGA ACGGACCGCC GCAGCTGCTG GCGTTCCGCG AGGCGAGCGT GGCGAACCTG
TACCTGGACT CCGGCCAGAC CGACGCCGCG CGCGCCGCGC TGGGCCGGGC CTTCTGCTTC
GGCCTGATCG CCCGCGACAT GCCCATCCAG GCGCGGATGG CGGGCGGCGC CGCACGCTAC
GCCCACGCCG TCGGCCAGAC CGAGCTCGCG ATGCGGCTGC TCGGCGCCTC CGAGAGCATG
CTCGGCGCGG CCGACCACAG CGACACCGAA CGCGTCGCGC TGGTGAAGAA GCTCGCCGGG
CAGCCCGACT ACGAGTCCTG CTATACGGCC GGAAAAAGCG CGACGCGCGA CGAGAACCAA
GCTCTCGTCG CGCACACGCT GGGTCTGCCG GAGGAGATCC TGACCGACCC GAAGAGCGGC
ATTCAGACCT TGCGGCCGTA G
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| Protein sequence | MPLTVSILGP LEIRVDGAPV ALGGARLRTL MSRLALDAGR AVTVSALVDA LWGDEPPEGA
ANALQSLISR VRKVLGDPAL LASAPGGYRL AIAPESVDAM RFESLSRSGR EALRADDPSA
ARATLREALA LWRGPALADV ADAAFAVAPA ARLDELRLAA LTDRLDAELR LGHAAEALAE
LEALGAEHPL RENIAALHVR ALYAVGRQAD ALAVYEQVRR ALADQLGIDP SKDLAEVHLA
VLRSDPALAP PALEHAPRTN LKSRLTSFVG RDEEVTRIGK MLDASRLVTL VGPGGAGKTR
LAGEAAQRVL ERFPDGAWLA ELAPVTDPGE VPQAVLSALG PRESRMMSSN GSPAAAAALL
RSAEGHLIET LAEKRILLIL DNCEHLVGAA AGLAETLLGH APGLRVLATS REPLTIDGES
LFPVPPLGLP DAEDFDEAGA RARESRRLAA MGRADSRSRT PADGNGSGSG NGNGNGNGLG
NGIGGETCDP TTGGGTYSVT DEAVICAPSG GSGSLASAGR NRAPASESAD PSTYTVADTV
LAYPAVRLFA DRAAAVVPDF AVDADTLPDV IRICRSLDGL PLAIELAAAR LRTLPLHQIA
SRLSDRFRLL TGGSRTAMPR HQTLRAVVAW SWELLSDDER DLAERLAVFP GGVTAAAAAA
VTPGLDADSA FDLLSALVDK SLLQSVPTEP GQDPRFRMLE TLREYGADRL SETGRLAVTR
RAHAAFFLEL AETAEPQLRR SQQMAWLKRL NAERDNILAA LRFAAADEDA DTAIRLAAAM
SWYWTLGDQN QEGRSWTRLA LQVPGPSPKE ARAIVSVMAR ITSVMEDYLW EEVPRMTREI
AAEIAALGEI EHPLLALAAV IAPMLSDDRE QLNAAVEKYG VHPDPWVGAM LHLMRGMSAE
NAGVRAPVRA DLEHASAVFE ELGDRWGLSA ALNGLASLAV TDGDDETALR LQSEALELIQ
EINAFTSAAQ IQIGRAQLLT RLGQTDAARA LLEEVLESAR RSGSQMSCFV AMLGLSEHHR
QSGETDRAWH YLNMASVEFI DSWNGPPQLL AFREASVANL YLDSGQTDAA RAALGRAFCF
GLIARDMPIQ ARMAGGAARY AHAVGQTELA MRLLGASESM LGAADHSDTE RVALVKKLAG
QPDYESCYTA GKSATRDENQ ALVAHTLGLP EEILTDPKSG IQTLRP
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