Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1379 |
Symbol | |
ID | 8332717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1565966 |
End bp | 1566724 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954527 |
Product | coenzyme A transferase |
Protein accession | YP_003112143 |
Protein GI | 256390579 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.243531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG TGACCCGCGC CGAAGTCTGC GTCGCCGCCT GCGCCGAAGC CTGGCGCGGC GACGGCGAGA TCATCGCCTC GCCGATGGGC CTGATCCCGG CGCTCGGCGC CCGACTGGCC AAGCTGACCT TCGCCCCCGG ACTCATGCTC TCCGACGGCG ACGCGAACTA CCTGACCGAC CCCACCGGCG CCGCCTCGCA CGTCGAGGCG CACATCCCCT ACCGCCAGCT GTTCGACGTC GTCTGGCACG GCTCGCGCCA CGTCATGATG GGCGCCAGCC AACTGGACAA GTTCGGCAAC CAGAACATCT CCGCCATCGG CACGGACTTC ACGCGCCCCA AGGCGCAGCT GATCGGCGTC CGCGGCGCGC CGGGCAACAC CGTCAACCAC CCGACGAGCT ACTGGATCGC CAACCACTCC CCCAAGGTGT TCGTGGAGAA GGTGGACACC GTCTCAGGGC TCGGATACGA CCGCGCGCGC GGCGTCGGAT ACGCGGCGCG CTTCCACGAG ATCCGCCGCA TCGTGACGAA CCTGGCGGTG TTCGACTTCC AGACCAAGGA CCACCGCATG CGCCTGCGGT CGATCCATCC CGGCGTCTCG GTCGACGACG TGGTGGCGGC GACCGGCTTC GTCCTGGTCG GCACCGACAA CCCGGACACC ACCCCGGAGC CGGACGCCGA GGCGCTGCGG CTGATCCGCG AGGTCCTGGA CCCGAAGACC ACCCGCGAGC GCGAAGTCCC GTCCGCCGGA AGGGGATGA
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Protein sequence | MSDVTRAEVC VAACAEAWRG DGEIIASPMG LIPALGARLA KLTFAPGLML SDGDANYLTD PTGAASHVEA HIPYRQLFDV VWHGSRHVMM GASQLDKFGN QNISAIGTDF TRPKAQLIGV RGAPGNTVNH PTSYWIANHS PKVFVEKVDT VSGLGYDRAR GVGYAARFHE IRRIVTNLAV FDFQTKDHRM RLRSIHPGVS VDDVVAATGF VLVGTDNPDT TPEPDAEALR LIREVLDPKT TREREVPSAG RG
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