Gene Caci_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1379 
Symbol 
ID8332717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1565966 
End bp1566724 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID644954527 
Productcoenzyme A transferase 
Protein accessionYP_003112143 
Protein GI256390579 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.243531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TGACCCGCGC CGAAGTCTGC GTCGCCGCCT GCGCCGAAGC CTGGCGCGGC 
GACGGCGAGA TCATCGCCTC GCCGATGGGC CTGATCCCGG CGCTCGGCGC CCGACTGGCC
AAGCTGACCT TCGCCCCCGG ACTCATGCTC TCCGACGGCG ACGCGAACTA CCTGACCGAC
CCCACCGGCG CCGCCTCGCA CGTCGAGGCG CACATCCCCT ACCGCCAGCT GTTCGACGTC
GTCTGGCACG GCTCGCGCCA CGTCATGATG GGCGCCAGCC AACTGGACAA GTTCGGCAAC
CAGAACATCT CCGCCATCGG CACGGACTTC ACGCGCCCCA AGGCGCAGCT GATCGGCGTC
CGCGGCGCGC CGGGCAACAC CGTCAACCAC CCGACGAGCT ACTGGATCGC CAACCACTCC
CCCAAGGTGT TCGTGGAGAA GGTGGACACC GTCTCAGGGC TCGGATACGA CCGCGCGCGC
GGCGTCGGAT ACGCGGCGCG CTTCCACGAG ATCCGCCGCA TCGTGACGAA CCTGGCGGTG
TTCGACTTCC AGACCAAGGA CCACCGCATG CGCCTGCGGT CGATCCATCC CGGCGTCTCG
GTCGACGACG TGGTGGCGGC GACCGGCTTC GTCCTGGTCG GCACCGACAA CCCGGACACC
ACCCCGGAGC CGGACGCCGA GGCGCTGCGG CTGATCCGCG AGGTCCTGGA CCCGAAGACC
ACCCGCGAGC GCGAAGTCCC GTCCGCCGGA AGGGGATGA
 
Protein sequence
MSDVTRAEVC VAACAEAWRG DGEIIASPMG LIPALGARLA KLTFAPGLML SDGDANYLTD 
PTGAASHVEA HIPYRQLFDV VWHGSRHVMM GASQLDKFGN QNISAIGTDF TRPKAQLIGV
RGAPGNTVNH PTSYWIANHS PKVFVEKVDT VSGLGYDRAR GVGYAARFHE IRRIVTNLAV
FDFQTKDHRM RLRSIHPGVS VDDVVAATGF VLVGTDNPDT TPEPDAEALR LIREVLDPKT
TREREVPSAG RG