| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1378 |
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| Symbol | |
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| ID | 8332716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1564889 |
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| End bp | 1565959 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644954526 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_003112142 |
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| Protein GI | 256390578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.36272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAGC AGCGGATCCG CACCCGGTGG ACGGAGATCG TGGGCGTCCG GCACCCGATC
GTGCAGACCG GCATGGGCTG GGTCGCCGGT CCGCACCTGG TGACCGCGAC CGCCCGCGCC
GGAGCGTTGG GGATCCTGGC GTCGGCGACC ATGTCCTACG ACGAGCTGGC CGCGGCGATC
CGTGAAGTGA AGGAGCGTAC TGATGCTCCC TTCGGTGTAA ATCTGAGGGC TGATGCCGCC
GACGCCGCCG AACGCGTCGA TCTGCTCATC AAGGAAGGGG TGCGGGTCGC CTCCTTCGCG
CTGGCGCCGA AGCGGGAGCT GATCGCGAAG CTGAAGGACG CCGGGACCGT GGTCGTGCCG
TCGATCGGCG CGAAGCGGCA CGCCGAGAAG GTCGCGGCGT GGGGCGTGGA CGCGGTGGTG
GTGCAGGGCG GCGAGGGCGG CGGGCACACC GGCGGCGTCG CGACCAGCCT GCTGCTGCCG
CAGATCACCG CCGCCGTGGA CATCCCGGTC CTGGCCGCCG GCGGCTTCTT CGACGGACGC
GGACTCGCGG CGGCATTGGC CTACGGCGCC GACGGCATCG CGATGGGGAC GCGGTTCCTG
CTGACCTCCG ACTCGCGCGT TCCCGAGGCG GTGAAGGCGT TGTATCTGGC GGCGGACGTG
AACGGGACCA TCGCGACGCC GAAGATCGAC GGCGTCCCGC ACCGCGTGCT GCGCACCGGG
CTCGTGGAGC AGATCGAGCG CTCCGGAACG GCGAGTTCGC TGCTGCGCTC GGCCCGCAAC
GGCTTGGCGT TCAAGAAGAT GACCGGCATG TCGCTGCGCG CGATGGCCAA GGACGGCTTG
GCGATGCGCA AGCATCACGG CTTGCGCCTG GGACAGGTCG TGATGGCGGC GAACACGCCG
ATGCTGCTGA AAGCCGGGCT GGTACAGGGG AATCCGGCGG CCGGGGTGCT GTCCGCCGGT
CAGGTCGTCG GCCTGATCGA GGATCTGCCG AGCTGCGAGG ACCTCGTCGA CCGGATCATC
GCCGAGGCGG TGGCTGCTTT GTCGGGGGCA TCGGCGACTG TAGTGGGCTA A
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| Protein sequence | MLEQRIRTRW TEIVGVRHPI VQTGMGWVAG PHLVTATARA GALGILASAT MSYDELAAAI
REVKERTDAP FGVNLRADAA DAAERVDLLI KEGVRVASFA LAPKRELIAK LKDAGTVVVP
SIGAKRHAEK VAAWGVDAVV VQGGEGGGHT GGVATSLLLP QITAAVDIPV LAAGGFFDGR
GLAAALAYGA DGIAMGTRFL LTSDSRVPEA VKALYLAADV NGTIATPKID GVPHRVLRTG
LVEQIERSGT ASSLLRSARN GLAFKKMTGM SLRAMAKDGL AMRKHHGLRL GQVVMAANTP
MLLKAGLVQG NPAAGVLSAG QVVGLIEDLP SCEDLVDRII AEAVAALSGA SATVVG
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