Gene Caci_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1375 
Symbol 
ID8332713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1562713 
End bp1563219 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID644954523 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003112139 
Protein GI256390575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGT TGACCGCGTT CGGGAATCAG CTTTTGGCAG TACACGGCTG GCTGCGGGAG 
CAACTGGGGC GGCTGCGCGA CGCCGCTGAG GACGGAACGG CCGTCGATAC CTCCGACCTG
GATCTGCGGG CCCACTGTTT CGCCTTCTGC GCCGCACTCG AGGACCACCA CCGGCTGGAG
GACACCTCGG TATTTCTCGC CGTGGTCGCC GAATATCCGG AGCTGGAATC CGTCGTCGCC
GAGCTGATGC GGGACCACGA GCAGATCGCC GCGCTGCTGC GGCAGGTGCG GATCGTGGCG
GACGCGCTCG CTGACGAGCC GTCGCCGGAG GAACTGCGCC GGCTGCGCAA CGAGCTGGAC
GGCTTGGCGG CGTTGGCGGA ATCGCACTTC ACCTACGAGG AACGCAAGCT TGTCGCCGCG
CTCGATCAGC TCACCGGGGG CGACCTCGCC CCGTTCGCCG ATCCCGCGCT CGCGGATCAT
GTGCGGCAGA ACAACTCGCG CGGTTGA
 
Protein sequence
MDQLTAFGNQ LLAVHGWLRE QLGRLRDAAE DGTAVDTSDL DLRAHCFAFC AALEDHHRLE 
DTSVFLAVVA EYPELESVVA ELMRDHEQIA ALLRQVRIVA DALADEPSPE ELRRLRNELD
GLAALAESHF TYEERKLVAA LDQLTGGDLA PFADPALADH VRQNNSRG