Gene Caci_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1374 
Symbol 
ID8332712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1561623 
End bp1562684 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID644954522 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003112138 
Protein GI256390574 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCGC TCCTTTACGC CACCCTCATC GCGCTGGTCT GTTCGCTGGC GGGAACCCCG 
GTGGCGATCC GGTACTTCAC CCGCCGGGGC TGGGGACAGG AGATCCGCGA CGAGCTCCCG
GAGATGCATC AGGTCAAGCG GGGCACGCCG ACGATGGGCG GCACGGTCAT CGTCCTGTCC
ACGCTGGTCG CCTACTTCGT GACCAAGCTC GCGACGATGA AGGCGCCGAC GAGCTCGGGC
CTGCTGGTCC TGTTCCTGAT GGCAGGCCTC GGCGCGGTCG GATTCATGGA CGACTTCATC
AAAATCGTCC GACAGCGCTC GCTGGGATTG CGGGCGCGGG CGAAACTCGC CGGACAGCTG
GCCGTGACGC TCACCTTCGC GGTCCTCGTC CTGCACTTCC GCAACACCGC CGGTCTGACG
CCGGCGAGCG AGAACATCTC GTTCCTGCGC GACATCGGCT GGCTCAGCCT CGGACCGGCG
CTCTTCCTCC TGTGGAGCTA TGTGATGATC GCGGGCTGGT CCAACGCGGT CAACCTCACC
GACGGCCAGG ACGGTCTGGC CGCCGGCACC TCGGTCATGG CCTTCGGCGC CTACGTGGTC
ATCGGCCTGT GGCAGTACGG ACAGAACTGC GCCGTCTCCC CGAGCCAGGG CTGCTACCAG
GTCCGCGACC CGCTGGACCT GGCGATCGTC GCGGCCGCGG TGATGGGCGC CTGCTTCGGC
TTCCTGTGGT GGAACGCCGC CCCGGCGCAG ATCTACATGG GAGACACCGG CTCGCTCGCG
TTGGGCGGCG CCTTCGCGGG ACTGGCGATC TGCTCGCGGA CCGAACTGCT CGCCGTGCTC
ATCGGCGGCC TGTTCCTCAT GGAGCTGCTC TCGGTGGTCA TCCAGGTCAC CTCCTTCAAG
CTGCGGCACA AACGGGTGTT CTTGAACTCG CCGATCCACC ACCATTTCGA GCAGAAGGAG
TGGAAGGAAG TCACCATCAC GATCCGGTTC TGGATCATCG CAGGGCTCTG TGTGGCGCTG
GGTCTCGGTG TGTTCTACGG CGGATTCAAG GCCTCTGCCT GA
 
Protein sequence
MRALLYATLI ALVCSLAGTP VAIRYFTRRG WGQEIRDELP EMHQVKRGTP TMGGTVIVLS 
TLVAYFVTKL ATMKAPTSSG LLVLFLMAGL GAVGFMDDFI KIVRQRSLGL RARAKLAGQL
AVTLTFAVLV LHFRNTAGLT PASENISFLR DIGWLSLGPA LFLLWSYVMI AGWSNAVNLT
DGQDGLAAGT SVMAFGAYVV IGLWQYGQNC AVSPSQGCYQ VRDPLDLAIV AAAVMGACFG
FLWWNAAPAQ IYMGDTGSLA LGGAFAGLAI CSRTELLAVL IGGLFLMELL SVVIQVTSFK
LRHKRVFLNS PIHHHFEQKE WKEVTITIRF WIIAGLCVAL GLGVFYGGFK ASA