Gene Caci_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1373 
Symbol 
ID8332711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1560271 
End bp1561482 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID644954521 
ProductAlkane 1-monooxygenase 
Protein accessionYP_003112137 
Protein GI256390573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.935228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGT CGACCCTCGG TTCCACCGGT GTGCGGCCGG AGGCGCAGGC CTGGCAGGAC 
GGCAAGCGGT ACCTGTGGCC GCTGGCGCTC GTCGTGCCGA TCCTGCCCTA CGTCGGTTTC
GGGCTGTGGC ATCGCTTCGA CAACGCGCTC GCCTGGTACC TGACGCCGTT CCTGGTCTAC
GTCATGGTGC CGATCGGCGA CTGGCTGATC GGCGAGGACG CCGGCAATCC GCCGGTGGAG
CGTGAGGCGC AGCTGCAGTC GGCCTGGTAC TACCGGGTGC TCACCTTCCT GTACTTGCCG
CTGCAATTCG GCTCGCTGGT CCTCGGGGCG TGGGCCTGGA GCCAGCCGCA CGTGAACCTG
GCGTCCAGGG TCGGCATCGT GGTCACCGTC GGCATCGTGA CCGGTATCGC CATCAACACC
GCGCACGAAC TCGGGCACAA GCGCGAGGAC GTCGAGCGCT GGCTGTCGAA GATCGCCCTC
GCGCCGTCCG GCTACGGGCA CTTCTACGTC GAGCACAACC GCGGCCACCA CGTCCGTGTC
GCGACGCCCG AGGACCCGGC GTCGGCGCGC CTCGGCGAGT CGTTCTACCG CTTCTGGCCG
CGCACGGTCT GGGGTTCGCT GAAGTCGGCG TGGGTGCTGG AGACCAAGAA GCACCGCCTG
CGCAAGCGCT CGCCGTGGAC GCTCCGCAAC GACGTCCTCA ACGCCTGGCT GATGACCCTG
CTCCTGTTCG CAGCCCTCAC CGTCTGGCTC GGCGTCGGCG TGCTGCCGTT CCTGCTCGTG
CAGATGGTCT TCGGCTTCTC GCTGCTGGAG ATCGTGAACT ATCTCGAGCA CTACGGCCTG
CTGCGCCAGC GGACCGCGAG CGGGCGCTAC GAGAAGGTCG AGCCCGTCCA CAGCTGGAAC
AGCGACCGGC TCTCGACCAA CGTCTTCCTC TACCAACTCC AGCGCCACAG CGACCACCAC
TCCTACCCGA ACCGCCGCTA CCAGGTCCTG CGGTCCTTCG ACGAGGCGCC GCAACTCCCG
GGCGGTTACG CCACGATGAT CGTCGTCGCG CTGTTCCCGC CGCTGTGGCG CCGCGTCATG
GACCAGCGCG TGCTCGACCA CTACGACGGC GACGCCCTGA AGGCGAACCT GACGCCGAAG
CTCCGGGCGA AGTACGAGGC CGAGGCAGCC GCTGCGGCTT CGGCCGGAGC TACGGCTACC
GCACGACGCT GA
 
Protein sequence
MSASTLGSTG VRPEAQAWQD GKRYLWPLAL VVPILPYVGF GLWHRFDNAL AWYLTPFLVY 
VMVPIGDWLI GEDAGNPPVE REAQLQSAWY YRVLTFLYLP LQFGSLVLGA WAWSQPHVNL
ASRVGIVVTV GIVTGIAINT AHELGHKRED VERWLSKIAL APSGYGHFYV EHNRGHHVRV
ATPEDPASAR LGESFYRFWP RTVWGSLKSA WVLETKKHRL RKRSPWTLRN DVLNAWLMTL
LLFAALTVWL GVGVLPFLLV QMVFGFSLLE IVNYLEHYGL LRQRTASGRY EKVEPVHSWN
SDRLSTNVFL YQLQRHSDHH SYPNRRYQVL RSFDEAPQLP GGYATMIVVA LFPPLWRRVM
DQRVLDHYDG DALKANLTPK LRAKYEAEAA AAASAGATAT ARR