Gene Caci_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1363 
Symbol 
ID8332701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp1551252 
End bp1551998 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID644954511 
Producthypothetical protein 
Protein accessionYP_003112127 
Protein GI256390563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.384055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.691326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTG AACCCACTCC GACCCGCCGC CCGATCGCCG CCGTCCGGAT CAGCACGATC 
GCGCTGCTCG GCATCGTCGC CGCGGTCGCG GTCCCGGCCT GCGCCGCCGC GATCGTCCTG 
TCGGGCACCG TCGACAGCAA GCAGGTGCAG CAGAATCTCG GCATGGACCA GCCGGTCAGC 
CGGGTGGTCA TCGTCGACAG CGACAGCAGC GTCCACGTCA CCGCCAACCC CGCGCTGTTC 
GGCGTGAGCG GCCAGGCGAC GCTGAGCTGG CACGCCTTCA GCGGCACCAG CCACGCGAAG 
GTCGTCGAGC AGTACGCCGA CGGCGTGCTG ACGCTGAGCA AGGACTGCGG CGGCATCGAC 
TGCGGCGCGG ACATCGACAT CCAGGTGCCG CCGAAGGTCT CGGTACAGGT CAACACCAGC 
AACGCGGGGA TCTCTGTCAC CGGCGTCCTC GGCGCGGTGG ATCTGCACAG CTCGAACGCG 
AGCATCACGG CGAAGCAGCT CGGATCCGGC GACGCGACCC TGGCCACCCA GAACGCCTCG 
ATCCACGCCT CGTTCACCGG CGCCCCGAAG AGCATCAGGG CGACCACCAG CAACGCGAGC 
GTCAGCATCG TCACGGACGG CCACACGCCG TATTACGACG ACGTCAAGAC CTCCAACGGC 
GACACGAACC TGCAGAACGT CCGAGACCGC CGGTCCGCCA ACGTCCTCTA CATCCACACT 
TCCAGCGGCG GAATCACGGT CAAGTAG
 
Protein sequence
MSSEPTPTRR PIAAVRISTI ALLGIVAAVA VPACAAAIVL SGTVDSKQVQ QNLGMDQPVS 
RVVIVDSDSS VHVTANPALF GVSGQATLSW HAFSGTSHAK VVEQYADGVL TLSKDCGGID 
CGADIDIQVP PKVSVQVNTS NAGISVTGVL GAVDLHSSNA SITAKQLGSG DATLATQNAS 
IHASFTGAPK SIRATTSNAS VSIVTDGHTP YYDDVKTSNG DTNLQNVRDR RSANVLYIHT 
SSGGITVK