Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1362 |
Symbol | |
ID | 8332700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1550469 |
End bp | 1551140 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954510 |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003112126 |
Protein GI | 256390562 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.323106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.883441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCCTC AATCACATGA CGAACCGGCG GTAACCGGGA CCGGGACCGG CACAGGCACC GACGATCCGC GGCTGCCGGC GACCAGCTGG GCGGTGCTCG GCATGCTGGC CTTCGAGCAG GAGCTGTCCG GCTACGACAT CAAGAAGCGG GCCGACTCGT CGCTGAAGCT GTTCTACTGG TCGCCGTCGT TCAGCCAGAT CTACGGCGAG CTCAAGCGGT TGGAGAAGCA CGGGTATGTG ACGTCGCGGA CCGTGATGCA GGACGAGGTG CGCGGCAAGC GGGTGTACAC GATCAGCGGC GCGGGGCGCG AGGCGGTGCG CCGGTGGGCG CGGACGGCGC CGGTCGAGGT GCCGGTGCTG AAGCACGGCG TGCTTCTACG GGTCTGGTTG GGACACCTCA CCCAGCCCGA GCGGCTGCGC GAGATCGTGG CGGAGCACCG CGACAACTCC GAGCGGCGGC GCGCCGAGGC CGCGGTGGAC GTCGCCGCCG CGCACGACGA GACGGCGTGG GCCCATCCCG AGATCGCGCT GAAGTGGGCC GAGCGGTATC ACGCGGCGGA GCGGGATCTG GCCGAGCGGA TGCTGGCGGA TCTGGACGCG CTGGCGGCTT CGGGGCGTGC CACCGCACCA GCGGCCGCGG CGATATCTTC GGGACCTGAT GACAACAGCT GA
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Protein sequence | MAPQSHDEPA VTGTGTGTGT DDPRLPATSW AVLGMLAFEQ ELSGYDIKKR ADSSLKLFYW SPSFSQIYGE LKRLEKHGYV TSRTVMQDEV RGKRVYTISG AGREAVRRWA RTAPVEVPVL KHGVLLRVWL GHLTQPERLR EIVAEHRDNS ERRRAEAAVD VAAAHDETAW AHPEIALKWA ERYHAAERDL AERMLADLDA LAASGRATAP AAAAISSGPD DNS
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