| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1352 |
|---|
| Symbol | |
|---|
| ID | 8332690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1539956 |
|---|
| End bp | 1540894 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644954500 |
|---|
| Product | proline iminopeptidase |
|---|
| Protein accession | YP_003112116 |
|---|
| Protein GI | 256390552 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.800954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCCTT ACGCCACCGG ATTTCTCGAC GTCGGCGACG GGAATCGGAT TTACTACGAA
GAACTCGGCA ACCCCGACGG CAAGCCGGCG GTGAACCTGC ACGGCGGTCC CGGCAGCGGC
TCGATGAAGC GCCCGACCAA GGCCTGGGAC CCCGAGAAGT GGCGCGTCAT CCGCTTCGAC
CAGCGCGGGT GCGGGCTCAG TACGCCCAGC GCCGCCGACC CCGCGACGGA CATGTCCGTC
AACACCACGC AGCACCTCAT CCGCGACATC GAGCTTCTGC GCGAGCATCT GGGTATTGAG
AAGTGGCTGG TGAAGGGCGG CTCGTGGGGT GCCGCCCTGG CCCTGCTCTA CGCGCAGGCG
CACCCCGAGC GCGTCACCGA GATGATCATC CCGGCGGTCA CCACGACCCG TCCGGAGGAG
ACCGACTGGC TGTACCACGG CGCCCGCCGC CTGTTCCCCG AAGCCTGGGA CCGCTTCCGC
AACCATGTGC CGGAGGACGA GCGCGACGGA AACCTGCTCC TGGCATACGG ACGCCTGGTA
GCGAACCCGG ACCGCGCGGT GCGCGAAGCC GCGGCGGCGG AGTGGATGAG GTGGGAGGAC
ACCTTGATCT CCCAGGAATC CAACGGCAAG CCCGGCTCCT ACAGCGCGGT GGTCGACGAC
GACCGGGTGG CCTTCGTCCG CATCTGCGCG CACTACTTCG GCAGCGACGC CTGGCTGGAG
CCGGACCAGG TTCTGCGCAA CGTCGACAAG CTGCGCGGCA TCCCGGCGGT CCTCGTCCAC
GGCCGCCACG ATCTGGGCAG CCCGGTCTAC ACCGCCTGGG AGCTGGCGCA GGCGTGGCCG
GACGCGAAGC TGGTGATCAT CGAGGACTCC GGGCACACCG GCAGCGAGGC GATGGGGCAG
GCGCTCAACG AGGCGGCGGA GGAGTTCTCG AAGCGATAG
|
|---|
| Protein sequence | MGPYATGFLD VGDGNRIYYE ELGNPDGKPA VNLHGGPGSG SMKRPTKAWD PEKWRVIRFD
QRGCGLSTPS AADPATDMSV NTTQHLIRDI ELLREHLGIE KWLVKGGSWG AALALLYAQA
HPERVTEMII PAVTTTRPEE TDWLYHGARR LFPEAWDRFR NHVPEDERDG NLLLAYGRLV
ANPDRAVREA AAAEWMRWED TLISQESNGK PGSYSAVVDD DRVAFVRICA HYFGSDAWLE
PDQVLRNVDK LRGIPAVLVH GRHDLGSPVY TAWELAQAWP DAKLVIIEDS GHTGSEAMGQ
ALNEAAEEFS KR
|
|---|
| |