Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1347 |
Symbol | |
ID | 8332685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1535438 |
End bp | 1536244 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954495 |
Product | hypothetical protein |
Protein accession | YP_003112111 |
Protein GI | 256390547 |
COG category | [S] Function unknown |
COG ID | [COG3305] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.5454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACG GCCGAAAACG GCACCGCTTC GACTGGAGCC TGCTGGGCTG CGCGCTCAGC GGCCACGTGC TGTACGCGCC GACGGAGCCG GCGCTGCGAG CTCGGCTGAC CGCCGAGACG GCGGGCGGCG TGACGTGGCG GTGCTTGCGG TGCGCGGACT TCGTGCCGGT CGGTTCTGCC GCGCCGGGGG CGGCGGCACC CACGCCACCA TCCGGCCCGG CCGAGGACGC GCCGCTGGTG AAGCGCGGGG CGGAGATGCG CGACGCCGTG CTGCTGCGAT TCTTCGCGGT CGAGCGCTGG ATCCGAGCAC TGTTGCTCGG CGCGGCGGCG TACGTGGTGC ACCGCTTCGC CGGACGTCAG AACGACCTGC GCCAGGCTTT CGACCAGGCG GCGCCGGTGG TGAAGCAGGT GTTCGGCAAA GCCGGCTTCG ACCTGCAGAA CTCGAAGACA CTGGAGCTCC TGCAGAAGGC AGTCGACGCG CGCCCGACGA CCCTGGCATG GATCATCGCA GCGCTGGCAG CCTACGCGGT GGTCGAGGCG GTGGAGGGCG TCGGCCTGTG GCTGCTGCAA CGGTGGGGCG AGTACTTCGC CTTCGTCGCC ACCGGCATGT TCCTCCCGTT CGAGGTCTAC GAGCTGACCC ACCGAGTCAG CCCACTGAAG CTAGGCACAT TCCTCCTGAA CCTGGCCCTG GTGCTCTACC TGGTGTGGAC GAAGCGCCTG TTCGGCGTAC GCGGCGGAAA GCGAGCTTAC GAAGCGCAGC GACACGCGGC TTCGCTGCTG GAGGTGGAGC GCGCCGCGGC GGAGTAG
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Protein sequence | MTDGRKRHRF DWSLLGCALS GHVLYAPTEP ALRARLTAET AGGVTWRCLR CADFVPVGSA APGAAAPTPP SGPAEDAPLV KRGAEMRDAV LLRFFAVERW IRALLLGAAA YVVHRFAGRQ NDLRQAFDQA APVVKQVFGK AGFDLQNSKT LELLQKAVDA RPTTLAWIIA ALAAYAVVEA VEGVGLWLLQ RWGEYFAFVA TGMFLPFEVY ELTHRVSPLK LGTFLLNLAL VLYLVWTKRL FGVRGGKRAY EAQRHAASLL EVERAAAE
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