Gene Caci_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1347 
Symbol 
ID8332685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1535438 
End bp1536244 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID644954495 
Producthypothetical protein 
Protein accessionYP_003112111 
Protein GI256390547 
COG category[S] Function unknown 
COG ID[COG3305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.5454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG GCCGAAAACG GCACCGCTTC GACTGGAGCC TGCTGGGCTG CGCGCTCAGC 
GGCCACGTGC TGTACGCGCC GACGGAGCCG GCGCTGCGAG CTCGGCTGAC CGCCGAGACG
GCGGGCGGCG TGACGTGGCG GTGCTTGCGG TGCGCGGACT TCGTGCCGGT CGGTTCTGCC
GCGCCGGGGG CGGCGGCACC CACGCCACCA TCCGGCCCGG CCGAGGACGC GCCGCTGGTG
AAGCGCGGGG CGGAGATGCG CGACGCCGTG CTGCTGCGAT TCTTCGCGGT CGAGCGCTGG
ATCCGAGCAC TGTTGCTCGG CGCGGCGGCG TACGTGGTGC ACCGCTTCGC CGGACGTCAG
AACGACCTGC GCCAGGCTTT CGACCAGGCG GCGCCGGTGG TGAAGCAGGT GTTCGGCAAA
GCCGGCTTCG ACCTGCAGAA CTCGAAGACA CTGGAGCTCC TGCAGAAGGC AGTCGACGCG
CGCCCGACGA CCCTGGCATG GATCATCGCA GCGCTGGCAG CCTACGCGGT GGTCGAGGCG
GTGGAGGGCG TCGGCCTGTG GCTGCTGCAA CGGTGGGGCG AGTACTTCGC CTTCGTCGCC
ACCGGCATGT TCCTCCCGTT CGAGGTCTAC GAGCTGACCC ACCGAGTCAG CCCACTGAAG
CTAGGCACAT TCCTCCTGAA CCTGGCCCTG GTGCTCTACC TGGTGTGGAC GAAGCGCCTG
TTCGGCGTAC GCGGCGGAAA GCGAGCTTAC GAAGCGCAGC GACACGCGGC TTCGCTGCTG
GAGGTGGAGC GCGCCGCGGC GGAGTAG
 
Protein sequence
MTDGRKRHRF DWSLLGCALS GHVLYAPTEP ALRARLTAET AGGVTWRCLR CADFVPVGSA 
APGAAAPTPP SGPAEDAPLV KRGAEMRDAV LLRFFAVERW IRALLLGAAA YVVHRFAGRQ
NDLRQAFDQA APVVKQVFGK AGFDLQNSKT LELLQKAVDA RPTTLAWIIA ALAAYAVVEA
VEGVGLWLLQ RWGEYFAFVA TGMFLPFEVY ELTHRVSPLK LGTFLLNLAL VLYLVWTKRL
FGVRGGKRAY EAQRHAASLL EVERAAAE