| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1345 |
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| Symbol | |
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| ID | 8332683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1529791 |
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| End bp | 1534188 |
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| Gene Length | 4398 bp |
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| Protein Length | 1465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954493 |
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| Product | glycoside hydrolase family 38 |
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| Protein accession | YP_003112109 |
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| Protein GI | 256390545 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.326956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCC AGATCAAGTC CGCGGACTCG ATGGACCTTT TCGTCGGAAC CGATAGGGAA
CCGCGTCAAG TCCTCCGGGT CGTCGTCCAG CGGGCCGTCA CCGACGGTGC GGTGACTGTA
TCGCTTCTCG CGGCGAAGGT GCGAGCAGCC TGCGAACTCG CGCCCGGGGA CGGCGAGGCC
GTGGTCGATC TGGCGATGGA GACCGACCCC GGCGTGGAAC CCGGCACGCG CCTGGCCGCA
CAGCTGAGGG TGCTCGGCGC GGACGGCGAG ACCCTCGCCG AGCAGCCGGT CGCCGTCACG
GTGGCCGAGC CCGGCTGGAC GATGTACCTG GTCTCGCACT TCCACTACGA CCCGGTCTGG
TGGAACACGC AAGCCGGCTA CACCCAGACC TGGGAGCTGC AGGGCAACGA CGGCACGACG
CGCCCGGTCT GGGAGAACAA CGCGTTCCAT CTCGTCAAAG CGCACCTCGA TCTCGCCGCC
GCGGACCCCG ACTACACCTT CGTGCTCGCC GAGGTCGACT ACCTCAAGCC CTTCTGGGAC
GTGTACCCGC AGTATCGCGC GCTTCTGCGG GAACTGATAT CCACCGGGCG GGTGGAGGTG
ATGGGCGGTA CCTACAACGA GCCCAACACC AACCTGACCG GCCTGGAGAC CACGATCCGC
AACCTGGTCT ACGGCATCGG CTACCAGCGC GACATCATGG GCGCCGACCC GCGCACCGCT
TGGCAGCTCG ACGTCTTCGG GCACGACCCG CAGTTCCCCG GTCTGGTCGC CGACGCCGGG
CTGAGCTCCA CGTCGTGGGC CCGTGGGCCC TACCACCAGT GGGGCCCGAT GCTGACGAAG
TTCGACGGGG TCCAGGGCGA TGTCAAGAAC ATGCAGTTCC CCGCTGAGTT CGAGTGGATC
TCGCCGTCGG GGCGCGGCGT GATCACCCAC TACATGCCGA ACCACTACTC GGCCGGTTGG
TGGATGGACT CCTCGGCGAC GCTGGAGGAG GCGGAGGAGA AGGTCTACGG CCTTTTCCTC
GGTCTCAAGC AAGCCGCCGC CACCCGCAAC ACACTGCTGC CGGTCGGCAC CGACTACACC
CCGCCGAACA AGTGGGTCAC CGCGATCCAC CGCGACTGGA ACGCGCGCTA CGTCTGGCCG
CGCTTCGTCA CCGGTCTGCC GCGCGACTTC TTCGCCGCCG TGCACGCCGA ACTCACCGAA
CGCGGCGTGC GCCCGAGCCC GCAGACCCGC GACATGAACC CGGTCTACAC CGGCAAGGAC
GTGTCGTACA TCGACACCAA GCAGGCCCAG CGCGCGGCGG AGACCGCGGC GGCCGACGCC
GAGAAGCTGG CGACCTTCGC CTCGCTGCTG GGCTACGGCC GCTACCCGAG CGCCGCGCTG
GACAAAGTGT GGCGGCAGCT GGCCTACGGC GCGCACCACG ACGCGATCAC CGGCTCGGAG
TCCGACCAGG TCTACCTCGA CCTGGTGACC GGCTGGCGCG AGGCGCACGA CCTGGCCGCC
GAGGCTCGCG ACGCGGCGCT GGAGGCGATC TTCCGCAACG TCGAGACCTA TGGCGGCGCG
GGCAACGGGA CGATCGGGGT GTTCAATACC CTCGCCTTCG AGCGGACCGA CCTGGTGCGG
GTGACGGTGC GGCTGCCCGA GAGCGGCGAC ATCGACGGGC TCCGGCTCGC CGACGAGGGC
GGCGAGCCGG TGCCGTTCGT GGTCGAGGCG CGGGACGGGA CGCGGGTCGA TGTCGCCTTC
GTCGCCGACG GCGTTCCGGG GATGGGATGG CGGAGCTGGT ATGTCGAGTT CGAGGCCGGT
GGCTCGGGCT TGGAACGCGA TGCTTGGCGT GCGATCGACG AGCTTCCGGC TTCGATCGCC
AACGAGTACT TCGAGGTCGC GGTCGATCCG GCGCGCGGTG GCGGACTGAG CGGGATTGTC
GAGCTCGTGA GCGGCCGGCA GCTGCTGAAG CCCGGCGAGA TCGGCAACGA GCTGCGGGTC
AGTGAGGAGT ATCCGCAGCA TCCTGAGTTC GGCGAGGGTC CTTGGCACTT GGTGCCGAAC
GGGACTGTTG TCGGCTCGGC TGGTGCGCCG GCATCTTCGG TACGCGCGGA GGAGTCGCCC
CTCGGGCGTC GTTATGTCGT CACTGGAACT GTCGGCGACG TCGAGTACGA GCAGCGCATC
ACGCTTCACC ACGGTTTGGA CCGCGTCGAC TTCCGCACGC GGGTGCTGGA CTTCACCGGC
GCCGACCGGT TGCTGCGCGT GAAGTTCCCC TGCGACATCC CCGGCGCGCG CCCGGTTTCC
GAGGTCGCCG GCGCTGTCAT CGGTCGCGGG TTCGCGCTGC CCGACTCGGA TGTCGCGGTC
GCGCCGTGGA CGCTGGACAA CCCGGCGAAC ACGTTCTTTG CTCTTGGCAG CACTGCGACT
GTGCGCCTGA GCGGCCTTAC TGATGTTGCT GATGCCGCCG ATGCCGATGC TGCCGATGCC
GACCTCGGTC GGGTCGCCAT TTCTGTCGCC GAAGTCGTCG CCGATGATCT GGATCTGCAC
GCCGACGCGG TACGTGAGCT GGTCGTCGCA CTGGCTCGGG TCGGCGTCAC CGCGACCACC
ACGACGCCTG AGGGGGCGCG GTACGGGTGG CTGCACGTCG ACTCCAACCT GCCGGACGTT
CGCATCGTCA TCGGCGGGCC GGATACCAAT GCGCTCGCCG CCGAGATCTT CGAACACTGC
GATCCCACGA TCCAGCAGGA CTTTGAAGGG CTTCTGAAGA GCCAGGGGCG CGCGTGCTTC
TTCATTCCGG CGGCGGTTCC GGTGGAGGAG GCGTGGGTAC CGAACGCGGA CCTCCGGGAC
GTGCGGGCGC TGCCGGTGCT GGTCATCGCG GGGGCTCGGG CGGAGGACAC GGCGGAGTGC
GTGCGCTCGG CTGCCGCCGC GTTCGCTGCC GACACCTCAC TGTCCGCCGT CACGGCCGAC
CCCGCTGACA CGGCTTTGCT CGACGACCAC ACGGTCGGCT TGATCAACAA CGGTCTGCCC
GGTTTCGCCG TCGACCCGTC GGGCGCGTTG CACTTGTCGC TGATGCGGTC CTGCACCGGG
TGGCCGTCGG GCGTGTGGCT CGATCCGCCG CTGCGGCGGT CGCCGGACGG TTCGGCGTTC
CAGTTGCAGC ACTGGACGCA CGATTTCGAC TACGCGCTGG TGAGTGGCGC GGGGGATTGG
CGTGCGGTCG GTCTGGTCGC GGCAGGTGCG GCTTTCTCGG CGCCGATGCT GGCGCGGCAG
GAGGCGGCGC ACCGTGGTCC GCTGCCGGGG CGGCATGCGC TGCTGACGAT CACGCCGGAG
CGCGCCGCGC AGGTGACGGC TGTGAAACCG GCTGGGAATC CGGAGTCGGT CGGCTCGGCG
TTGGACGCGT CACCGGAATT GGGCTTCATG GTGCGGCTGG TCGAGGCGAA CGGCACTGGC
AAGACGGTTG CGGTGCGCAG CCCGCTTGGC GTGCTGTCGA GCGACCGTGC CGATTTGCTG
GAGGAGTGCG GGCTGCGCTG CGAGGTGCGT GCCGCCGGCT CTGTGGAGCT GGCCGGATCG
CAGATCTCGA CGGCGATCAT GGTTCCGCAT CAGGGCTCTG GTTCCACGGC GACGACTCCG
GTGCTCGGCC GCGATAGTGA GCCTGCGCAG CCGGTGTACT CGCGCTACTG GCTGCACAAT
CGCGGGCCGG CGCCGATGGG CTTCCTGCCG GTCTCGGTGG CTGCGACACC GACGGTGCTC
GGCAGTGGCG GCGAGGTGTC GGTCGCGGTG GCGAGTCAGT ACACGGATAC GACGTTCGAG
GGGATGCTGA CGGTTGTCGC GCCGTCGGGC TGGAGTGTGG AGCCCGAGTC GCGTCCCGTT
TCGCTGGAGC CTGGCGGGCA CACGGTTTTC CCGCTGACTG TTACGCCTTC GGGCAAGGCT
GCGTCGGCGC CGGGGATGTA CTTCGTGCGC GTGCAGCTGG CGGTGGGGGA GTCGGTGATC
GAGGACGTCG TCAGTGTTCT GATCGACGCT CCCGAGTACG CGCCGCCGGC GACCTCGCCC
GAGACCGAGA TCGAACTCGG CGTCCAGACC CAGGGCACGA AGAGCGACAC CGCGCGCCCC
ACCGGCCTGG AGATCACCTC GATCACCCCC TCGCTGACCC TGACGCGCGG CGAGCACACC
ACCCTGCGCG TCACCTTGAC CAACACCACC CGCAGCCGCA TCGACGGCGA AGCGATGCCG
GTCAGCCCCT GGGGCACCTG GGACTTCATC GGTCCGTACG CCACCGCCTT CAGCATCGAG
CCCGGCGCCA CCACCGAGGT CGCCTTCGAC GTCACCATCC CCGCCACAGC CGACCCCGGC
CACTGGTGGA CCCTGGTGAA GCTGATGTGG TTCGGCCGCG CACAGTACAC ACCAGCAATC
CCCGTGGCAG TCCGATGA
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| Protein sequence | MAVQIKSADS MDLFVGTDRE PRQVLRVVVQ RAVTDGAVTV SLLAAKVRAA CELAPGDGEA
VVDLAMETDP GVEPGTRLAA QLRVLGADGE TLAEQPVAVT VAEPGWTMYL VSHFHYDPVW
WNTQAGYTQT WELQGNDGTT RPVWENNAFH LVKAHLDLAA ADPDYTFVLA EVDYLKPFWD
VYPQYRALLR ELISTGRVEV MGGTYNEPNT NLTGLETTIR NLVYGIGYQR DIMGADPRTA
WQLDVFGHDP QFPGLVADAG LSSTSWARGP YHQWGPMLTK FDGVQGDVKN MQFPAEFEWI
SPSGRGVITH YMPNHYSAGW WMDSSATLEE AEEKVYGLFL GLKQAAATRN TLLPVGTDYT
PPNKWVTAIH RDWNARYVWP RFVTGLPRDF FAAVHAELTE RGVRPSPQTR DMNPVYTGKD
VSYIDTKQAQ RAAETAAADA EKLATFASLL GYGRYPSAAL DKVWRQLAYG AHHDAITGSE
SDQVYLDLVT GWREAHDLAA EARDAALEAI FRNVETYGGA GNGTIGVFNT LAFERTDLVR
VTVRLPESGD IDGLRLADEG GEPVPFVVEA RDGTRVDVAF VADGVPGMGW RSWYVEFEAG
GSGLERDAWR AIDELPASIA NEYFEVAVDP ARGGGLSGIV ELVSGRQLLK PGEIGNELRV
SEEYPQHPEF GEGPWHLVPN GTVVGSAGAP ASSVRAEESP LGRRYVVTGT VGDVEYEQRI
TLHHGLDRVD FRTRVLDFTG ADRLLRVKFP CDIPGARPVS EVAGAVIGRG FALPDSDVAV
APWTLDNPAN TFFALGSTAT VRLSGLTDVA DAADADAADA DLGRVAISVA EVVADDLDLH
ADAVRELVVA LARVGVTATT TTPEGARYGW LHVDSNLPDV RIVIGGPDTN ALAAEIFEHC
DPTIQQDFEG LLKSQGRACF FIPAAVPVEE AWVPNADLRD VRALPVLVIA GARAEDTAEC
VRSAAAAFAA DTSLSAVTAD PADTALLDDH TVGLINNGLP GFAVDPSGAL HLSLMRSCTG
WPSGVWLDPP LRRSPDGSAF QLQHWTHDFD YALVSGAGDW RAVGLVAAGA AFSAPMLARQ
EAAHRGPLPG RHALLTITPE RAAQVTAVKP AGNPESVGSA LDASPELGFM VRLVEANGTG
KTVAVRSPLG VLSSDRADLL EECGLRCEVR AAGSVELAGS QISTAIMVPH QGSGSTATTP
VLGRDSEPAQ PVYSRYWLHN RGPAPMGFLP VSVAATPTVL GSGGEVSVAV ASQYTDTTFE
GMLTVVAPSG WSVEPESRPV SLEPGGHTVF PLTVTPSGKA ASAPGMYFVR VQLAVGESVI
EDVVSVLIDA PEYAPPATSP ETEIELGVQT QGTKSDTARP TGLEITSITP SLTLTRGEHT
TLRVTLTNTT RSRIDGEAMP VSPWGTWDFI GPYATAFSIE PGATTEVAFD VTIPATADPG
HWWTLVKLMW FGRAQYTPAI PVAVR
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