Gene Caci_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1317 
Symbol 
ID8332652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1496377 
End bp1496688 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content71% 
IMG OID644954463 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_003112082 
Protein GI256390518 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTA TCACCCGTGA AGAGGTCGCC CACTTGGCGC TCCTGTCACG GCTCGACCTG 
TCCGACGACG AGCTGGCGCA CTACGCCGAG CAGCTCGACG TCATCCTCGG TTCGGTGGCC
CGCGTGAGCG AGGCCGTGCA GCTGCTCGGC CAGGGGCAGG ACATCCCGCC GACCTCGCAC
GCGCTGCCGC TGGTCAACGT CACCCGGCCC GATGTCGAGC GGCCGTGCCT GGATCCGGCG
GACGTGCTGG GCCAGGCGCC TGCCGCGCAG GATCAGCGAT TCCGCGTGCC GCGCATTTTG
GGGGAGGACT GA
 
Protein sequence
MPAITREEVA HLALLSRLDL SDDELAHYAE QLDVILGSVA RVSEAVQLLG QGQDIPPTSH 
ALPLVNVTRP DVERPCLDPA DVLGQAPAAQ DQRFRVPRIL GED