| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1314 |
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| Symbol | |
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| ID | 8332649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1491650 |
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| End bp | 1493788 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954460 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003112079 |
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| Protein GI | 256390515 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGAC CATTCGAGCC GGACTACGGC CCGAAGGCCG ATCCGGGACG TCTGTACGCC
TTCGTCGCTT CCGTCGGCGC GGCCGGGGTC ACCCTCCTGG CCGCGCTGTT GATCTTGAAC
TGGCGTGGTT CCGGGCCCAC CACGCAGTCC TTGCCGGCCT TGCTGATGAC CGTCTGTCTG
GTCTTCCTCG GGGAACTGCG ACCCCTGATG CGGTTGCAGC ACACGAACCG CGAGGCCGCC
ACCACCACGG TGTTCACCAT TGCCCTGCTG ATGCTCGCCG GCTGGCCGCT GGCGGCGATG
GTGCAGGCCG CGGCCTCCGT GGTGGGCGGG GCGGCCGGGC GCAAGACGTG GTGGCGCACG
CTGTTCAACG TCTCGCAGTT CACGCTGTCC CTCGGCGCGG CCTGCCTGGT GCTGCGCTGT
TTCGGCGTGG TCCCGACCCC GGACCGGCCG TGGGCGCCGA GCGTGACCTA CCTGGCCGCG
ATCCTGCTGG CCGGCGTCGC CTACTTCGTG GTGAACCTGT TCCTGGTCTG GCAGGCGGTC
GCGCTGTGGA CCGGCGCGCC GCTGCGCGGC ATAGCCTGCC GCGAGTGGCG GGTCGAGCTG
CAGGTGGTCG GCGCCTCGGT GGTGCTGGCG CCGCTGATCA CGGTGGTGAT GCGGCACGAG
CCGTATCTCA TCGTGCTGTT CATACCGGTG CTCCTGGTCT TCTATCGCAG TGCCCTGGCT
TTCGACGAGA GCGAGTGGCA GTCGCTGCAC GACCCGCTGA CCGCCCTGCC CAACCGCAAG
GCCCTGCGCC GCCAGGCCGA GACCATGCTC GGCACCGACA CGGTCGCGGG GAACGACGGC
CGCTCCTCGC TGTACTCCAC CGGCCGCGCC CCGGCCGCGG TGGCCGTCCC GCCGGGCAAG
ATCGGGTTGT TCCTGCTGGA CCTCGACCGG TTCAAGGAAG TCAACGACAC CCTCGGCCAC
GCCGCCGGCG ACGAGCTGAT CCGCGAGGTC GCGCAACGGC TGTCGGCGGC GGTCCGCGCC
GAGGACATGG TCGCCCGGCT CGGCGGCGAC GAGTTCGCGG TCCTGCTCCC GGGACTGCCG
GACGTGGAAG CGGCGCAGCA GTTGGCGCAG CGCCTGCTGG ACGCGGTCGC CGTCCCCTAC
CGGCTGCACG GCTTCAAACT CGACGTCGAG GCCTCCCTGG GCATCGCGCT GCACCCCGAC
GACGCCCGGC ACTACGACGT CCTGCTGCGG CACGCGGACG TGGCGATGTA CGAGGCCAAG
CGGAGCAAGA AGGGCTACGT CCGCTACGAC CCGGCCAAGG ACCGCAACAG CCCGGACCGG
CTCGGCCTGC TCAGCGATCT GCGCGAGGCG CTGGACGCCG GCCGGATCGA GGTGCACTAC
CAGCCGCAGG CCTCCTTCCA GAACGACCGC GTGGTCGGCG TCGAGGCGCT GGCCCGCTGG
CGGCACGAGG CGCGCGGCGC GATACCGCCG GAAACTTTCG TGAAGCTCGC TGAATCCAGC
GGTCTGATGG CGCGCCTGAC CGAGTACATC CTCGACGTCT CACTGCGCCA AGCCGCGCAG
TGGTGGCGCA GCGGCTACGG CGTGCCGCTG TCGGTCAACG TCTCCCTGCG CGACATCGAG
TCCGCCGGCT TCGTGGAGAT GGTCGCGCGC AAGCTCGCGC AGCACCGGGT CCGCCCCGAA
GCCCTCCGCC TGGAGGTCGC CGAGCGCGTC CTGGTCGGCG ACGCCCAGAG CGTCCGCGCG
ACCCTGATCG GCTTGTCCAA GCTCGGCATC CGGCTCTCCC TGGACAACTT CGGCACCGGC
TACGCCTCCC TGCTGACCCT GCGCCGCCTG CCCTTCGACG AGATCAAGAT CGACCGCTCC
TTCGTCGGCG GCATCGGCTT CGACGCCGAC GACGCCGCCA TCGTCCGCTC GACCATCGAC
CTCGCGCACT CCCTGGGACT GCGCGTCGTC GCCGAGGGCG TCGAGGACTC CGCCACCTGG
TCCACCCTCG ACGACTACGG CTGCGACGAA GCCCAAGGCT GGCTGGTCTC CAAGGCCCTG
CCCCCTGGCG AGATCTGCGC GCTGCTGGCG CTGCGGGTGC CCTCGGCGGC GCCGACGTCC
TCCGGTCCCG CGTCCACGCC GGACCAGCTC TCCGCCTGA
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| Protein sequence | MHRPFEPDYG PKADPGRLYA FVASVGAAGV TLLAALLILN WRGSGPTTQS LPALLMTVCL
VFLGELRPLM RLQHTNREAA TTTVFTIALL MLAGWPLAAM VQAAASVVGG AAGRKTWWRT
LFNVSQFTLS LGAACLVLRC FGVVPTPDRP WAPSVTYLAA ILLAGVAYFV VNLFLVWQAV
ALWTGAPLRG IACREWRVEL QVVGASVVLA PLITVVMRHE PYLIVLFIPV LLVFYRSALA
FDESEWQSLH DPLTALPNRK ALRRQAETML GTDTVAGNDG RSSLYSTGRA PAAVAVPPGK
IGLFLLDLDR FKEVNDTLGH AAGDELIREV AQRLSAAVRA EDMVARLGGD EFAVLLPGLP
DVEAAQQLAQ RLLDAVAVPY RLHGFKLDVE ASLGIALHPD DARHYDVLLR HADVAMYEAK
RSKKGYVRYD PAKDRNSPDR LGLLSDLREA LDAGRIEVHY QPQASFQNDR VVGVEALARW
RHEARGAIPP ETFVKLAESS GLMARLTEYI LDVSLRQAAQ WWRSGYGVPL SVNVSLRDIE
SAGFVEMVAR KLAQHRVRPE ALRLEVAERV LVGDAQSVRA TLIGLSKLGI RLSLDNFGTG
YASLLTLRRL PFDEIKIDRS FVGGIGFDAD DAAIVRSTID LAHSLGLRVV AEGVEDSATW
STLDDYGCDE AQGWLVSKAL PPGEICALLA LRVPSAAPTS SGPASTPDQL SA
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